New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 1616540 =174 (0.850)2 (0.010) 2/182 34.5 0.01 coding (83/2559 nt) uvrD DNA helicase II
?NC_014034 2807560 = 181 (0.800)coding (174/1059 nt) pyrD2 dihydroorotate oxidase
Rejected: Position hash score below cutoff.

CGGAACGCAAGCTATAGTGGCGCCCCATGAGCAGTATCCTTGATGATGACGATTTCGGCGGGCTGAGCCTGTCGCAACGCGCCATGATGGCGGCGCGGGGTCCGGTGGG....................................................................................................  <  NC_014034/1616648‑1616540
....................................................................................................TCCGGTGGGGCTGGCGGCAGGATTCGACAAGAACGCGGTGGCGCTGGGGCCGCTGATGCGGGCAGGCTTCGGATTTCTCGAGGTCGGCGCCGCGACCCCGCGCCCGCAG  >  NC_014034/2807560‑2807659
                                                                                                                                                                                                                 
                                                         gatctCTGAGCCTGTCGCAACGCGCCATGATGGCGGCGCGGGGTCCGGTGGGGCTGGCGGCAGGATTCGACAAGAACGCGGTGGCGCTGGGGCCGCTGATG                                                     <  2:3710696/96‑1 (MQ=255)
                                                              CTGAGCCTGTCGCAACGCGCCATGATGGCGGCGCGGGGTCCGGTGGGGCTGGCGGCAGGATTCGACAAGAACGCGGTGGCGCTGGGGCCGCTGATGagatc                                                >  1:3710949/1‑96 (MQ=255)
                                                                                                                                                                                                                 
CGGAACGCAAGCTATAGTGGCGCCCCATGAGCAGTATCCTTGATGATGACGATTTCGGCGGGCTGAGCCTGTCGCAACGCGCCATGATGGCGGCGCGGGGTCCGGTGGG....................................................................................................  <  NC_014034/1616648‑1616540
....................................................................................................TCCGGTGGGGCTGGCGGCAGGATTCGACAAGAACGCGGTGGCGCTGGGGCCGCTGATGCGGGCAGGCTTCGGATTTCTCGAGGTCGGCGCCGCGACCCCGCGCCCGCAG  >  NC_014034/2807560‑2807659

Base quality scores:  ATCG  < 3 ≤  ATCG  < 31 ≤  ATCG  < 33 ≤  ATCG  < 35 ≤  ATCG  < 41 ≤  ATCG