New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	1640006 =	75 (0.350)	31 (0.150)	10/188	27.5	0.22	intergenic (+86/‑59)	mccB/mccA	methylcrotonoyl‑CoA carboxylase subunit beta/methylcrotonoyl‑CoA carboxylase subunit alpha
	?	NC_014034	2209686 =	143 (0.630)					intergenic (+18/‑253)	cobO/cobQ1	cob(I)yrinic acid a,c‑diamide adenosyltransferase/cobyric acid synthase CobQ
Rejected: Position hash score below cutoff.

CGACAGGCGATCTCGGCCCTGTTGGCGATCAGGATCTTTTGAAACATCGCGGTCTCCTTCGTCAACGGCCGGGGCGCTGCCCCGTGGCGGAAGTGGCGGGGGGCGC.....................................................................................................  <  NC_014034/1640111‑1640006 ....................................................................................................GGGCGCTG.CCCCCGGACCCCCGGGATATTTGTGGCAAGATGAAACAGAGCGTTAGGGATTTGGTAACCATGATCGGGCAAGCTGGCAACACGGTACAGGGAGGGAT  >  NC_014034/2209686‑2209785                                                                                                                                                                                                                       GCGATCTCGGCCCTGTTGGCGATCAGGATCTTTTGAAACATCGCGGTCTCCTTCGTCAACGGCCGGGGCGCTGCCCCGTGGCGGAAGTGGCGGGGGGCGCT                                                                                                      <  1:2505123/101‑1 (MQ=1)       GCGATCTCGGCCCTGTTGGCGATCAGGATCTTTTGAAACATCGCGGTCTCCTTCGTCAACGGCCGGGGCGCTGCCCCGTGGCGGAAGTGGCGGGGGGCGCT                                                                                                      <  1:4175358/101‑1 (MQ=1)       GCGATCTCGGCCCTGTTGGCGATCAGGATCTTTTGAAACATCGCGGTCTCCTTCGTCAACGGCCGGGGCGCTGCCCCGTGGCGGAAGTGGCGGGGGGCGCT                                                                                                      <  1:428419/101‑1 (MQ=1)       GCGATCTCGGCCCTGTTGGCGATCAGGATCTTTTGAAACATCGCGGTCTCCTTCGTCAACGGCCGGGGCGCTGCCCCGTGGCGGAAGTGGCGGGGGGCGCT                                                                                                      <  2:1402525/101‑1 (MQ=1)         GATCTCGGCCCTGTTGGCGATCAGGATCTTTTGAAACATCGCGGTCTCCTTCGTCAACGGCCGGGGCGCTGCCCCGTGGCGGAAGTGGCGGGGGGCGCTG.C                                                                                                   <  1:1204484/101‑1 (MQ=1)          ATCTCGGCCCTGTTGGCGATCAGGATCTTTTGAAACATCGCGGTCTCCTTCGTCAACGGCCGGGGCGCTGCCCCGTGGCGGAAGTGGCGGGGGGCGCTG.CC                                                                                                  <  1:3182644/101‑1 (MQ=1)          ATCTCGGCCCTGTTGGCGATCAGGATCTTTTGAAACATCGCGGTCTCCTTCGTCAACGGCCGGGGCGCTGCCCCGTGGCGGAAGTGGCGGGGGGCGCTG.CC                                                                                                  <  2:1286528/101‑1 (MQ=1)            CTCGGCCCTGTTGGCGATCAGGATCTTTTGAAACATCGCGGTCTCCTTCGTCAACGGCCGGGGCGCTGCCCCGTGGCGGAAGTGGCGGGGGGCGCTG.CCCC                                                                                                <  1:1106617/101‑1 (MQ=1)            CTCGGCCCTGTTGGCGATCAGGATCTTTTGAAACATCGCGGTCTCCTTCGTCAACGGCCGGGGCGCTGCCCCGTGGCGGAAGTGGCGGGGGGCGCTG.CCCC                                                                                                <  2:2964591/101‑1 (MQ=1)             TCGGCCCTGTTGGCGATCAGGATCTTTTGAAACATCGCGGTCTCCTTCGTCAACGGCCGGGGCGCTGCCCCGTGGCGGAAGTGGCGGGGGGCGCTG.CCCCC                                                                                               <  2:3942957/101‑1 (MQ=1)             TCGGCCCTGTTGGCGATCAGGATCTTTTGAAACATCGCGGTCTCCTTCGTCAACGGCCGGGGCGCTGCCCCGTGGCGGAAGTGGCGGGGGGCGCTG.CCCCC                                                                                               <  2:3170201/101‑1 (MQ=1)              CGGCCCTGTTGGCGATCAGGATCTTTTGAAACATCGCGGTCTCCTTCGTCAACGGCCGGGGCGCTGCCCCGTGGCGGAAGTGGCGGGGGGCGCTG.CCCCCc                                                                                              <  2:3458200/101‑2 (MQ=1)              CGGCCCTGTTGGCGATCAGGATCTTTTGAAACATCGCGGTCTCCTTCGTCAACGGCCGGGGCGCTGCCCCGTGGCGGAAGTGGCGGGGGGCGCTG.CCCCCc                                                                                              <  2:2764940/101‑2 (MQ=1)              CGGCCCTGTTGGCGATCAGGATCTTTTGAAACATCGCGGTCTCCTTCGTCAACGGCCGGGGCGCTGCCCCGTGGCGGAAGTGGCGGGGGGCGCTG.CCCCCc                                                                                              <  2:1149489/101‑2 (MQ=1)              CGGCCCTGTTGGCGATCAGGATCTTTTGAAACATCGCGGTCTCCTTCGTCAACGGCCGGGGCGCTGCCCCGTGGCGGAAGTGGCGGGGGGCGCTG.CCCCCc                                                                                              <  1:2067289/101‑2 (MQ=1)               GGCCCTGTTGGCGATCAGGATCTTTTGAAACATCGCGGTCTCCTTCGTCAACGGCCGGGGCGCTGCCCCGTGGCGGAAGTGGCGGGGGGCGCTG.CCCCCcg                                                                                             <  1:2777056/101‑3 (MQ=1)                GCCCTGTTGGCGATCAGGATCTTTTGAAACATCGCGGTCTCCTTCGTCAACGGCCGGGGCGCTGCCCCGTGGCGGAAGTGGCGGGGGGCGCTG.CCCCCcgg                                                                                            <  2:2557792/101‑4 (MQ=1)                GCCCTGTTGGCGATCAGGATCTTTTGAAACATCGCGGTCTCCTTCGTCAACGGCCGGGGCGCTGCCCCGTGGCGGAAGTGGCGGGGGGCGCTG.CCCCCcgg                                                                                            <  2:2692596/101‑4 (MQ=1)                  CCTGTTGGCGATCAGGATCTTTTGAAACATCGCGGTCTCCTTCGTCAACGGCCGGGGCGCTGCCCCGTGGCGGAAGTGGCGGGGGGCGCTG.CCCCCcgggc                                                                                          <  1:729367/101‑6 (MQ=1)                       TGGCGATCAGGATCTTTTGAAACATCGCGGTCTCCTTCGTCAACGGCCGGGGCGCTGCCCCGTGGCGGAAGTGGCGGGGGGCGCTGCCCCCCGGGCCCCCc                                                                                      <  1:1215935/101‑2 (MQ=1)                       TGGCGATCAGGATCTTTTGAAACATCGCGGTCTCCTTCGTCAACGGCCGGGGCGCTGCCCCGTGGCGGAAGTGGCGGGGGGCGCTGCCCCCCGGGCCCCCc                                                                                      <  1:1648436/101‑2 (MQ=1)                        GGCGATCAGGATCTTTTGAAACATCGCGGTCTCCTTCGTCAACGGCCGGGGCGCTGCCCCGTGGCGGAAGTGGCGGGGGGCGCTGCCCCCCGGGCCCCCcg                                                                                     <  2:496413/101‑3 (MQ=1)                        GGCGATCAGGATCTTTTGAAACATCGCGGTCTCCTTCGTCAACGGCCGGGGCGCTGCCCCGTGGCGGAAGTGGCGGGGGGCGCTGCCCCCCGGGCCCCCcg                                                                                     <  1:479916/101‑3 (MQ=1)                                                                                              aGGCCGGGGGGGCTG.CCCCCGGACCCCCGGGATATTTGTGGCAAGATGAAACAGAGCGTTAGGGATTTGGTAACCATGATCGGGCAAGCTGGCAACACGGT              >  2:3549213/2‑101 (MQ=255)                                                                                              aGGCCGGGGGCGCTG.CCCCCGGACCCCCGGGATATTTGTGGCAAGATGAAACAGAGCGTTAGGGATTTGGTAACCATGATCGGGCAAGCTGGCAACACGGg              >  2:473562/2‑100 (MQ=255)                                                                                               GGCCGGGGGCGCTG.CCCCCGGACCCCCGGGATATTTGTGGCAAGATGAAACAGAGCGTTAGGGATTTGGTAACCATGATCGGGCAAGCTGGCAACACGGTA             <  1:632097/101‑1 (MQ=255)                                                                                                GCGGGGGGCGCTG.CCCCCGGACCCCCGGGATATTTGTGGCAAGATGAAACAGAGCGTTAGGGATTTGGTAACCATGATCGGGCAAGCTGGCAACACGGTAC            <  1:830544/101‑1 (MQ=255)                                                                                                   GGGGGCGCTG.CCCCCGGACCCCCGGGATATTTGTGGCAAGATGAAACAGAGCGTTAGGGATTTGGTAACCATGATCGGGCAAGCTGGCAACACGGTACAGG         >  1:4149137/1‑101 (MQ=255)                                                                                                   GGGGGCGCTG.CCCCCGGACCCCCGGGATATTTGTGGCAAGATGAAACAGAGCGTTAGGGATTTGGTAACCATGATCGGGCAAGCTGGCAACACGGTACAGG         <  2:2399470/101‑1 (MQ=255)                                                                                                   GGGGGCGCTG.CCCCCGGACCCCCGGGATATTTGTGGCAAGATGAAACAGAGCGTTAGGGATTTGGTAACCATGATCGGGCAAGCTGGCAACACGGTACAGG         >  2:4152635/1‑101 (MQ=255)                                                                                                    GGGGCGCTG.CCCCCGGACCCCCGGGATATTTGTGGCAAGATGAAACAGAGCGTTAGGGATTTGGTAACCATGATCGGGCAAGCTGGCAACACGGTACAGGG        >  2:3539370/1‑101 (MQ=255)                                                                                                                                                                                                                 CGACAGGCGATCTCGGCCCTGTTGGCGATCAGGATCTTTTGAAACATCGCGGTCTCCTTCGTCAACGGCCGGGGCGCTGCCCCGTGGCGGAAGTGGCGGGGGGCGC.....................................................................................................  <  NC_014034/1640111‑1640006 ....................................................................................................GGGCGCTG.CCCCCGGACCCCCGGGATATTTGTGGCAAGATGAAACAGAGCGTTAGGGATTTGGTAACCATGATCGGGCAAGCTGGCAACACGGTACAGGGAGGGAT  >  NC_014034/2209686‑2209785 Base quality scores:  ATCG  < 3 ≤  ATCG  < 23 ≤  ATCG  < 30 ≤  ATCG  < 34 ≤  ATCG  < 39 ≤  ATCG