New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	= 1674049	193 (0.960)	2 (0.010)	2/178	34.1	0.01	coding (448/1644 nt)	RCAP_rcc01546	AMP‑dependent synthetase and ligase
	?	NC_014034	= 2256069	186 (0.820)					intergenic (+537/+1932)	RCAP_rcc02088/RCAP_rcc02095	IS3 family transposase/hypothetical protein
Rejected: Position hash score below cutoff.

GGTGCTGTTCATCGACCGCGGCTTTGTTCCCACCATCGCCGGGCTGATCGACCAGATGCCCACCGTGAAGATGGTGGTGATGATGGGCGCGCGCGACGAGGCGCTGGCGG....................................................................................................  >  NC_014034/1673940‑1674049 ...................................................................................................GGCGCTGGCGGTCGTGGCCTTGCCGGAGCGCGACAGGTGCCAGCTCAGGAGTTCGCGCCTGTGGCAATCGATCACCAAGGCGAGCGACGCCCAGCCGTCCTTGCCGGTCCA  <  NC_014034/2256069‑2255970                                                                                                                                                                                                                                                                 GATCTACCAGATGCCCACCGTGAAGATGGTGGTGATGATGGGCGCGCGCGACGAGGCGCTGGCGGTCGTGGCCTTGCCGGAGCGCGACAGGTGCCAGCTCA                                                                  <  1:1991468/101‑1 (MQ=255)                                                   ACCAGATGCCCACCGTGAAGATGGTGGTGATGATGGGCGCGCGCGACGAGGCGCTGGCGGTCGTGGCCTTGCCGGAGCGCGACAGGTGCCAGCTCAAGAtg                                                             >  2:1991339/1‑99 (MQ=255)                                                                                                                                                                                                                    GGTGCTGTTCATCGACCGCGGCTTTGTTCCCACCATCGCCGGGCTGATCGACCAGATGCCCACCGTGAAGATGGTGGTGATGATGGGCGCGCGCGACGAGGCGCTGGCGG....................................................................................................  >  NC_014034/1673940‑1674049 ...................................................................................................GGCGCTGGCGGTCGTGGCCTTGCCGGAGCGCGACAGGTGCCAGCTCAGGAGTTCGCGCCTGTGGCAATCGATCACCAAGGCGAGCGACGCCCAGCCGTCCTTGCCGGTCCA  <  NC_014034/2256069‑2255970 Base quality scores:  ATCG  < 3 ≤  ATCG  < 18 ≤  ATCG  < 23 ≤  ATCG  < 31 ≤  ATCG  < 40 ≤  ATCG