New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 1692173 =195 (0.890)2 (0.010) 2/194 35.6 0.01 coding (16/201 nt) RCAP_rcc01560 hypothetical protein
?NC_014034 1964837 = 224 (0.990)coding (379/774 nt) bdhA 3‑hydroxybutyrate dehydrogenase
Rejected: Position hash score below cutoff.

GACGAGGTCACCGACACCGGCACAGCCGCCCTGCTAAGGTCAGCCATCGGCCGGAGACCCGGCCTTCTGACACCAAGGGAGCAAGAGATGTTCAAGACCAATG....................................................................................................  <  NC_014034/1692275‑1692173
....................................................................................................ATGCGGGCGGCGGGCTGGGGGCGGGTGGTCAACATCGCCTCGGCGCATGGGCTGACCGCCTCGCCGTTCAAATCGGCCTATGTGGCGGCCAAGCATGGCATTG  >  NC_014034/1964837‑1964936
                                                                                                                                                                                                           
                                GCTAAGGTCAGCCATCGGCCGGAGACCCGGCCTTCTGACACCAAGGGAGCAAGAGATGTTCAAGACCAATGCGGGCGGCGGGCTGGGGGCGGGTGGTCAAC                                                                        >  1:2204344/1‑101 (MQ=255)
                                         AGCCATCGGCCGGAGACCCGGCCTTCTGACACCAAGGGAGCAAGAGATGTTCAAGACCAATGCGGGCGGCGGGCTGGGGGCGGGTGGTCAACATCGCCTCG                                                               <  2:2204205/101‑1 (MQ=255)
                                                                                                                                                                                                           
GACGAGGTCACCGACACCGGCACAGCCGCCCTGCTAAGGTCAGCCATCGGCCGGAGACCCGGCCTTCTGACACCAAGGGAGCAAGAGATGTTCAAGACCAATG....................................................................................................  <  NC_014034/1692275‑1692173
....................................................................................................ATGCGGGCGGCGGGCTGGGGGCGGGTGGTCAACATCGCCTCGGCGCATGGGCTGACCGCCTCGCCGTTCAAATCGGCCTATGTGGCGGCCAAGCATGGCATTG  >  NC_014034/1964837‑1964936

Base quality scores:  ATCG  < 3 ≤  ATCG  < 31 ≤  ATCG  < 34 ≤  ATCG  < 35 ≤  ATCG  < 41 ≤  ATCG