New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 = 1694618194 (0.910)3 (0.010) 3/188 33.9 0.01 coding (310/1041 nt) RCAP_rcc01563 3‑hydroxyisobutyryl‑CoA hydrolase
?NC_014034 3420985 = 207 (0.920)coding (638/1404 nt) RCAP_rcc03221 hypothetical protein
Rejected: Position hash score below cutoff.

CGGTTTCGGGCATGGCGATTTGCGTCGTGTCGCCGACGATGCGGTGCCGCGCGTGCCCGCCGATGCCGACGCCGCCGCCCATCACGAAGCCCTGCATGAAGGCGAG....................................................................................................  >  NC_014034/1694513‑1694618
....................................................................................................GGCGAGCAATCGGAAAACCCCGCCTCGCGCGCGGCGATCAGATGCTCGGTGAAGCTCTCCGCCAGCGCCTTGGCCGCGGTTTCCGAAAACCTTGCGTAAAGGTCGA  >  NC_014034/3420985‑3421084
                                                                                                                                                                                                              
             GGCGATTTGCGTCGTGTCGCCGACGATGCGGTGCCGCGCGTGCCCGCCGATGCCGACGCCGCCGCCCATCACTAAGCCCTGCATGAAGGCGAGAGATCGGA                                                                                              >  1:1437475/1‑101 (MQ=255)
                            GTCGCCGACGATGCGGTGCCGCGCGTGCCCGCCGATGCCGACGCCGCCGCCCATCACGAAGCCCTGCATGAAGGCGAGCAATCGGAAAACCCCGCCTCGCG                                                                               >  1:1796910/1‑101 (MQ=255)
                                             GCCGCGCGTGCCCGCCGATGCCGACGCCGCCGCCCATCACGAAGCCCTGCATGAAGGCGAGCAATCGGAAAACCCCGCCTCGCGCGCGGCGATCAGATGCT                                                              <  2:1796791/101‑1 (MQ=255)
                                                                                                                                                                                                              
CGGTTTCGGGCATGGCGATTTGCGTCGTGTCGCCGACGATGCGGTGCCGCGCGTGCCCGCCGATGCCGACGCCGCCGCCCATCACGAAGCCCTGCATGAAGGCGAG....................................................................................................  >  NC_014034/1694513‑1694618
....................................................................................................GGCGAGCAATCGGAAAACCCCGCCTCGCGCGCGGCGATCAGATGCTCGGTGAAGCTCTCCGCCAGCGCCTTGGCCGCGGTTTCCGAAAACCTTGCGTAAAGGTCGA  >  NC_014034/3420985‑3421084

Base quality scores:  ATCG  < 3 ≤  ATCG  < 29 ≤  ATCG  < 33 ≤  ATCG  < 35 ≤  ATCG  < 40 ≤  ATCG