New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 1715164 =207 (1.000)2 (0.010) 2/184 34.7 0.01 coding (696/2391 nt) RCAP_rcc01583 hypothetical protein
?NC_014034 = 3292538 149 (0.660)coding (212/1152 nt) drpA DNA protecting protein DprA
Rejected: Position hash score below cutoff.

GGGCGGGACCGGGCGATGACGGTCGTGGTGCTGTCTTCGGACACCCCCTTGGGCAAGCCCGATCACGGGCCGGAAAACCACCCGTTCCACGCCCCCGACGCGCCGGGC....................................................................................................  <  NC_014034/1715271‑1715164
....................................................................................................CGCCGGGCGGGCAGGGGCTGTAATCGGCAGATCCGGCGGCCCGGGCAATGCCCGGAAGCGCGTCCAGCGCGGCGGCGGCGCTGCCATGGTCTTTCAGCAATCGGTGGA  <  NC_014034/3292538‑3292439
                                                                                                                                                                                                                
                                                                      CGGAAAACCACCCGTTCCACGCCCCCGACGCGCCGGGCGGGCAGGGGCTGTAATCGGCAGATCCGGCGGCCCGGGCAATGCCCGGAAGCGCGTCCAGCGCG                                       >  2:2151581/1‑101 (MQ=255)
                                                                       GGAAAACCACCCGTTCCACGCCCCCGACGCGCCGGGCGGGCAGGGGCTGTAATCGGCAGATCCGGCGGCCCGGGCAATGCCCGGAAGCGCGTCCAGCGCGG                                      <  1:2151720/101‑1 (MQ=255)
                                                                                                                                                                                                                
GGGCGGGACCGGGCGATGACGGTCGTGGTGCTGTCTTCGGACACCCCCTTGGGCAAGCCCGATCACGGGCCGGAAAACCACCCGTTCCACGCCCCCGACGCGCCGGGC....................................................................................................  <  NC_014034/1715271‑1715164
....................................................................................................CGCCGGGCGGGCAGGGGCTGTAATCGGCAGATCCGGCGGCCCGGGCAATGCCCGGAAGCGCGTCCAGCGCGGCGGCGGCGCTGCCATGGTCTTTCAGCAATCGGTGGA  <  NC_014034/3292538‑3292439

Base quality scores:  ATCG  < 3 ≤  ATCG  < 20 ≤  ATCG  < 29 ≤  ATCG  < 35 ≤  ATCG  < 41 ≤  ATCG