New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 = 1765794196 (0.930)2 (0.010) 2/186 34.9 0.01 coding (1323/2403 nt) yaeT outer membrane protein assembly factor YaeT
?NC_014034 = 3317271 236 (1.040)coding (1616/1656 nt) RCAP_rcc03120 ABC transporter ATP‑binding protein
Rejected: Position hash score below cutoff.

TCCGCGCGCTTGGCTTCTTCTCCAAGGCCGATGTCGGCACGAAACCGGGCACCGGCCCCGATCAGGTGATCGTCGGCGTCGATGTCGAGGAACAGCCGACCGGCTCG....................................................................................................  >  NC_014034/1765688‑1765794
....................................................................................................CGGCTCGACCGCATCCGGGCCCAGACGGCGGATCTTGTCGTTTTCGTAATCCTCGAAGTTGCCCTCGAAGAATTCCACATGGGCGTCGCCCTCAAACGCCAGGATAT  <  NC_014034/3317271‑3317172
                                                                                                                                                                                                               
                                                               AGGTGATCGTCGGCGTCGATGTCGAGGAACAGCCGACCGGCTCGACCGCATCCGGGCCCAGACGGCGGATCTTGTCGTTTTCGTAATCCTCGAAGTTGCCC                                             >  1:718187/1‑101 (MQ=255)
                                                                      CGTCGGCGTCGATGTCGAGGAACAGCCGACCGGCTCGACCGCATCCGGGCCCAGACGGCGGATCTTGTCGTTTTCGTAATCCTCGAAGTTGCCCTCGAAGA                                      <  2:718107/101‑1 (MQ=255)
                                                                                                                                                                                                               
TCCGCGCGCTTGGCTTCTTCTCCAAGGCCGATGTCGGCACGAAACCGGGCACCGGCCCCGATCAGGTGATCGTCGGCGTCGATGTCGAGGAACAGCCGACCGGCTCG....................................................................................................  >  NC_014034/1765688‑1765794
....................................................................................................CGGCTCGACCGCATCCGGGCCCAGACGGCGGATCTTGTCGTTTTCGTAATCCTCGAAGTTGCCCTCGAAGAATTCCACATGGGCGTCGCCCTCAAACGCCAGGATAT  <  NC_014034/3317271‑3317172

Base quality scores:  ATCG  < 3 ≤  ATCG  < 20 ≤  ATCG  < 28 ≤  ATCG  < 33 ≤  ATCG  < 40 ≤  ATCG