New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 = 1767446168 (0.830)2 (0.010) 2/178 34.1 0.01 coding (512/576 nt) RCAP_rcc01633 outer membrane chaperone Skp family protein
?NC_014034 3428504 = 224 (0.990)coding (221/456 nt) RCAP_rcc03228 universal stress family protein
Rejected: Position hash score below cutoff.

CGAGATCCTGACCCGCCGCGGCGCGGTGATGGTGCTGGACCGGCGCGCGATCATCCGCGGCCTGGAAGCCGCCGACATCACCGAGGATCTGGCGCGGCTGATGGATGCGCG....................................................................................................  >  NC_014034/1767336‑1767446
....................................................................................................ATGGATGCGCGACAAGCAGGGGGTGAACCCCGATCTGGTGATCCGCGAGGGCGATCCGGTGACCGAAATCATGGGGCTGGTGCGCGAAGATCCGGAAATCGGCGTGCTGGT  >  NC_014034/3428504‑3428603
                                                                                                                                                                                                                   
                                                                    tCGCCGACATCACCGAGGATCTGGCGCGGCTGATGGATGCGCGACAAGCAGGGGGTGAACCCCGATCTGGTGATCCGCGAGGGCGATCCGGTGACCGAAAT                                            <  1:4441047/100‑1 (MQ=255)
                                                                     CGCCGACATCACCGAGGATCTGGCGCGGCTGATGGATGCGCGACAAGCAGGGGGTGAACCCCGATCTGGTGATCCGCGAGGGCGATCCGGTGACCGAAATa                                           >  2:4440775/1‑100 (MQ=255)
                                                                                                                                                                                                                   
CGAGATCCTGACCCGCCGCGGCGCGGTGATGGTGCTGGACCGGCGCGCGATCATCCGCGGCCTGGAAGCCGCCGACATCACCGAGGATCTGGCGCGGCTGATGGATGCGCG....................................................................................................  >  NC_014034/1767336‑1767446
....................................................................................................ATGGATGCGCGACAAGCAGGGGGTGAACCCCGATCTGGTGATCCGCGAGGGCGATCCGGTGACCGAAATCATGGGGCTGGTGCGCGAAGATCCGGAAATCGGCGTGCTGGT  >  NC_014034/3428504‑3428603

Base quality scores:  ATCG  < 3 ≤  ATCG  < 25 ≤  ATCG  < 29 ≤  ATCG  < 33 ≤  ATCG  < 40 ≤  ATCG