New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 = 177569200 (0.980)2 (0.010) 2/180 34.3 0.01 coding (1324/1386 nt) RCAP_rcc00155 peptide ABC transporter ATP‑binding protein
?NC_014034 2065198 = 145 (0.640)coding (716/1092 nt) plsX fatty acid/phospholipid synthesis protein PlsX
Rejected: Position hash score below cutoff.

CCTGTTCGCCGACGAGCCCACCTCGCGGCTGGATCCGGTGACGCAGGCGCTGACGATCAGGCTGATGGTCGGGATCGGCCGCGAGACCGGCATGGCGATGGTGATCGTCA....................................................................................................  >  NC_014034/177460‑177569
....................................................................................................GTGATCGTCACCGACGGCTTCACCGGCAATGTCGCGCTGAAGACCGGCGAGGGCACGGCGAAATTCGCGGGCGAGCTGATGCGCGAGGCCTTCACCTCGAGCCTGCTTTC  >  NC_014034/2065198‑2065297
                                                                                                                                                                                                                  
                                ATCCGGTGACGCAGGCGCTGACGATCAGGCTGATGGTCGGGATCGGCCGCGAGACCGGCATGGCGATGGTGATCGTCACCGACGGCTTCACCGGCAATGTC                                                                               >  1:3842632/1‑101 (MQ=255)
                                               CGCTGACGATCAGGCTGATGGTCGGGATCGGCCGCGAGACCGGCATGGCGATGGTGATCGTCACCGACGGCTTCACCGGCAATGTCGCGCTGAAGACCGGC                                                                <  2:3842379/101‑1 (MQ=255)
                                                                                                                                                                                                                  
CCTGTTCGCCGACGAGCCCACCTCGCGGCTGGATCCGGTGACGCAGGCGCTGACGATCAGGCTGATGGTCGGGATCGGCCGCGAGACCGGCATGGCGATGGTGATCGTCA....................................................................................................  >  NC_014034/177460‑177569
....................................................................................................GTGATCGTCACCGACGGCTTCACCGGCAATGTCGCGCTGAAGACCGGCGAGGGCACGGCGAAATTCGCGGGCGAGCTGATGCGCGAGGCCTTCACCTCGAGCCTGCTTTC  >  NC_014034/2065198‑2065297

Base quality scores:  ATCG  < 3 ≤  ATCG  < 30 ≤  ATCG  < 33 ≤  ATCG  < 35 ≤  ATCG  < 41 ≤  ATCG