New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 1781562 =164 (0.800)2 (0.010) 2/182 34.5 0.01 coding (1359/2892 nt) RCAP_rcc01644 FMN‑binding domain‑containing protein
?NC_014034 = 2387531 174 (0.770)coding (254/912 nt) RCAP_rcc02213 hypothetical protein
Rejected: Position hash score below cutoff.

AAAGCCGATCCCCGCCGCGCCCCAGATCGCCAGCCCGAAAGGATCGTAAAGCAGCACCTCGAGCCCGCCCGACACCAGCCCGCGCGCCACCGCCATCACCGTGACGATG....................................................................................................  <  NC_014034/1781670‑1781562
....................................................................................................GTGACGATGTTGCGCCCCGAGTCAAGCTTGCCCTTTTTCGCCGCATAGGCCGCCGCGGCGACCCCCGCCGCAAAGCCGCCCGCATGCGGGCCAAAGGCGCCAAAGGGGA  <  NC_014034/2387531‑2387432
                                                                                                                                                                                                                 
                                           TCGTAAAGCAGCACCTCGAGCCCGCCCGACACCAGCCCGCGCGCCACCGCCATCACCGTGACGATGTTGCGCCCCGAGTCAAGCTTGCCCTTTTTCGCCGC                                                                   >  1:800061/1‑101 (MQ=255)
                                             GTAAAGCAGCACCTCGAGCCCGCCCGACACCAGCCCGCGCGCCACCGCCATCACCGTGACGATGTTGCGCCCCGAGTCAAGCTTGCCCTTTTTCGCCGCAT                                                                 <  2:799979/101‑1 (MQ=255)
                                                                                                                                                                                                                 
AAAGCCGATCCCCGCCGCGCCCCAGATCGCCAGCCCGAAAGGATCGTAAAGCAGCACCTCGAGCCCGCCCGACACCAGCCCGCGCGCCACCGCCATCACCGTGACGATG....................................................................................................  <  NC_014034/1781670‑1781562
....................................................................................................GTGACGATGTTGCGCCCCGAGTCAAGCTTGCCCTTTTTCGCCGCATAGGCCGCCGCGGCGACCCCCGCCGCAAAGCCGCCCGCATGCGGGCCAAAGGCGCCAAAGGGGA  <  NC_014034/2387531‑2387432

Base quality scores:  ATCG  < 3 ≤  ATCG  < 27 ≤  ATCG  < 32 ≤  ATCG  < 35 ≤  ATCG  < 41 ≤  ATCG