New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 = 1933150220 (1.060)2 (0.010) 2/184 23.6 0.01 coding (44/531 nt) ccmG thiol:disulfide interchange protein
?NC_014035 = 8626 93 (0.710)coding (903/1026 nt) RCAP_rcp00011 hypothetical protein
Rejected: Position hash score below cutoff.

CGCTGATCCGCGGCGCGCAGGTGAAACGGGCGTTGAAAGCCCAGGAAGAACGGATGAAGAACGATGGCTAAGCCCTTGATGTTTCTTCCGCTGCTGGTGATGGCGGG....................................................................................................  >  NC_014034/1933044‑1933150
...................................................................................................ATGGCGGGTCTGAACCATTTGTTCCAAGCAGATCCGACCGGCGATCCGCAAAATTACGCCCGCATCCCGCAGACATTGGCCCCCGAAGTTCCCGCCCGGATCGTCGCG  <  NC_014035/8626‑8527
                                                                                                                                                                                                               
                                 ctAAAGCCCAGGAAGAACGGATGAAGAACGATGGCTAAGCCCTTGATGTTTCTTCCGCTGCTGGTGATGGCGGGTCTGAACCATTTGTTCCAAGCAGATCC                                                                           <  2:1131615/99‑1 (MQ=255)
                                   AAAGCCCAGGAAGAACGGATGAAGAACGATGGCTAAGCCCTTGATGTTTCTTCCGCTGCTGGTGATGGCGGGTCTGAACCATTTGTTCCAAGCAGATCCag                                                                         >  1:1131706/1‑99 (MQ=255)
                                                                                                                                                                                                               
CGCTGATCCGCGGCGCGCAGGTGAAACGGGCGTTGAAAGCCCAGGAAGAACGGATGAAGAACGATGGCTAAGCCCTTGATGTTTCTTCCGCTGCTGGTGATGGCGGG....................................................................................................  >  NC_014034/1933044‑1933150
...................................................................................................ATGGCGGGTCTGAACCATTTGTTCCAAGCAGATCCGACCGGCGATCCGCAAAATTACGCCCGCATCCCGCAGACATTGGCCCCCGAAGTTCCCGCCCGGATCGTCGCG  <  NC_014035/8626‑8527

Base quality scores:  ATCG  < 3 ≤  ATCG  < 24 ≤  ATCG  < 31 ≤  ATCG  < 35 ≤  ATCG  < 41 ≤  ATCG