New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 = 1968859187 (0.910)2 (0.010) 2/182 34.5 0.01 coding (626/756 nt) rpsB 30S ribosomal protein S2
?NC_014034 2412026 = 182 (0.800)coding (648/1455 nt) RCAP_rcc02239 GntR family transcriptional regulator
Rejected: Position hash score below cutoff.

CCATCCTCGAAGCGCAGAAGCTGGGCATCCCGGTCGTGGCCGTGGTCGACACCAACTGCTCGCCCAAGGGCGTGGACTACATCATCCCCGGCAACGATGACGCCGCCCG....................................................................................................  >  NC_014034/1968751‑1968859
....................................................................................................CGCCGCCCGTTCCCCCGGACCCAGCAGAACCTGCGCCGCCAGCCAGAGCCCGTTCTGCGCCCCCATGGTGATCAGCACCTCGGAGGGCACGGCCGCAATGCCGCGACGG  >  NC_014034/2412026‑2412125
                                                                                                                                                                                                                 
                                           GGTCGACACCAACTGCTCGCCCAAGGGCGTGGACTACATCATCCCCGGCAACGATGACGCCGCCCGTTCCCCCGGACCCAGCAGAACCTGCGCCGCCAGCC                                                                   >  1:3962242/1‑101 (MQ=255)
                                                                          GACTACATCATCCCCGGCAACGATGACGCCGCCCGTTCCCCCGGACCCAGCAGAACCTGCGCCGCCAGCCAGAGCCCGTTCTGCGCCCCCATGGTGATCAG                                    <  2:3961986/101‑1 (MQ=255)
                                                                                                                                                                                                                 
CCATCCTCGAAGCGCAGAAGCTGGGCATCCCGGTCGTGGCCGTGGTCGACACCAACTGCTCGCCCAAGGGCGTGGACTACATCATCCCCGGCAACGATGACGCCGCCCG....................................................................................................  >  NC_014034/1968751‑1968859
....................................................................................................CGCCGCCCGTTCCCCCGGACCCAGCAGAACCTGCGCCGCCAGCCAGAGCCCGTTCTGCGCCCCCATGGTGATCAGCACCTCGGAGGGCACGGCCGCAATGCCGCGACGG  >  NC_014034/2412026‑2412125

Base quality scores:  ATCG  < 3 ≤  ATCG  < 26 ≤  ATCG  < 30 ≤  ATCG  < 33 ≤  ATCG  < 40 ≤  ATCG