New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 = 2064796165 (0.830)2 (0.010) 2/176 33.9 0.01 coding (314/1092 nt) plsX fatty acid/phospholipid synthesis protein PlsX
?NC_014034 = 2402551 168 (0.740)coding (739/1338 nt) RCAP_rcc02232 FAD dependent oxidoreductase
Rejected: Position hash score below cutoff.

GTCACGCGACCGGCGTTGTCACGATGCATGACAAGCCCGCGGCGGTGATGCGCGGCGGCAAGGACACGTCGATGTGGTCGACGATCGATGCGGTGCGCGACGGCGCGGCGCA...................................................................................................  >  NC_014034/2064685‑2064796
....................................................................................................CGGCGCGGCGCACCTGCCGACGCAGCCAGTGCAGCAGCACCGAGGCGGGGGCGCCCAGCGGCACCTCGCCCAGCGAAGTGGCCAGCGGCGTTCCCGGCCCATGCACGCGCG  <  NC_014034/2402551‑2402453
                                                                                                                                                                                                                   
                                                   ctGGCGGCAAGGACACGTCGATGTGGTCGACGATCGATGCGGTGCGCGACGGCGCGGCGCACCTGCCGACGCAGCCAGTGCAGCAGCACCGAGGCGGGGGC                                                             <  2:2436841/99‑1 (MQ=255)
                                                     GGCGGCAAGGACACGTCGATGTGGTCGACGATCGATGCGGTGCGCGACGGCGCGGCGCACCTGCCGACGCAGCCAGTGCAGCAGCACCGAGGCGGGGGCag                                                           >  1:2436998/1‑99 (MQ=255)
                                                                                                                                                                                                                   
GTCACGCGACCGGCGTTGTCACGATGCATGACAAGCCCGCGGCGGTGATGCGCGGCGGCAAGGACACGTCGATGTGGTCGACGATCGATGCGGTGCGCGACGGCGCGGCGCA...................................................................................................  >  NC_014034/2064685‑2064796
....................................................................................................CGGCGCGGCGCACCTGCCGACGCAGCCAGTGCAGCAGCACCGAGGCGGGGGCGCCCAGCGGCACCTCGCCCAGCGAAGTGGCCAGCGGCGTTCCCGGCCCATGCACGCGCG  <  NC_014034/2402551‑2402453

Base quality scores:  ATCG  < 3 ≤  ATCG  < 20 ≤  ATCG  < 27 ≤  ATCG  < 33 ≤  ATCG  < 41 ≤  ATCG