New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 = 2073899184 (0.890)2 (0.010) 2/182 34.5 0.01 coding (376/903 nt) RCAP_rcc01917 hypothetical protein
?NC_014034 = 3047540 205 (0.910)coding (520/3477 nt) RCAP_rcc02857 diguanylate cyclase/phosphodiesterase
Rejected: Position hash score below cutoff.

CGACCCTGACCCGCAGCCCCGCGCGTTCCGCCGTCACCAGACGGTTGCGCCATTTCCCCTGCAGCCCGGCGCGCAGGGCGGCCTCCTCGGGGCTCAGATCCCAGATCGC...................................................................................................  >  NC_014034/2073791‑2073899
....................................................................................................CCAGATCGCTGTTTTCGGTCGAGATGCGCAGGATTTCCGCGCTTTCCCGGGCCTTGCGGCGGGCTTCCTCGGTGGCGCGCAGCGCGGCAAGGCCGGTGCAGAGGATCC  <  NC_014034/3047540‑3047442
                                                                                                                                                                                                                
                                        ACGGTTGCGCCATTTCCCCTGCAGCCCGGCGCGCAGGGCGGCCTCCTCGGGGCTCAGATCCCAGATCGCTGTTTTCGGTCGAGATGCGCAGGATTTCCGCG                                                                     >  2:874064/1‑101 (MQ=255)
                                                         CCTGCAGCCCGGCGCGCAGGGCGGCCTCCTCGGGGCTCAGATCCCAGATCGCTGTTTTCGGTCGAGATGCGCAGGATTTCCGCGCTTTCCCGGGCCTTGCG                                                    <  1:874149/101‑1 (MQ=255)
                                                                                                                                                                                                                
CGACCCTGACCCGCAGCCCCGCGCGTTCCGCCGTCACCAGACGGTTGCGCCATTTCCCCTGCAGCCCGGCGCGCAGGGCGGCCTCCTCGGGGCTCAGATCCCAGATCGC...................................................................................................  >  NC_014034/2073791‑2073899
....................................................................................................CCAGATCGCTGTTTTCGGTCGAGATGCGCAGGATTTCCGCGCTTTCCCGGGCCTTGCGGCGGGCTTCCTCGGTGGCGCGCAGCGCGGCAAGGCCGGTGCAGAGGATCC  <  NC_014034/3047540‑3047442

Base quality scores:  ATCG  < 3 ≤  ATCG  < 33 ≤  ATCG  < 34 ≤  ATCG  < 35 ≤  ATCG  < 41 ≤  ATCG