New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 = 2073987148 (0.740)6 (0.030) 6/178 29.8 0.04 coding (288/903 nt) RCAP_rcc01917 hypothetical protein
?NC_014034 2074009 = 159 (0.700)coding (266/903 nt) RCAP_rcc01917 hypothetical protein
Rejected: Position hash score below cutoff.

CGGGGCTCAGATCCCAGATCGCCTGATGGCGCGCGGTGATCAGCGGCACCAGCCCCGGACCCGCCACCGGCGTCTCGGGCGTGACGATCAGCAGCCCCGGCAGCGCCCGC...................................................................................................  >  NC_014034/2073878‑2073987
...................................................................................................GCAGCGCCCGCCGCCGGATCTCTTCGGGCAGATCGGGGACAAAGACCGGACCGCGGCTGCACAGCCACAGCCCGCCCCGCCCCAGCACCTGCGCCAGACCAATCCGCCGC  >  NC_014034/2074009‑2074107
                                                                                                                                                                                                                 
                                   GTGATCAGCGGCACCAGCCCCGGACCCGCCACCGGCGTCTCGGGCGTGACGATCAGCAGCCCCGGCAGCGCCCGCCGCCGGATCTCTTCGGGCAGATCGGG                                                                           >  1:3693844/1‑101 (MQ=255)
                                            GGCACCAGCCCCGGACCCGCCACCGGCGTCTCGGGCGTGACGATCAGCAGCCCCGGCAGCGCCCGCCGCCGGATCTCTTCGGGCAGATCGGGGACAAAGAC                                                                  >  2:4272189/1‑101 (MQ=255)
                                                        GGACCCGCCACCGGCGTCTCGGGCGTGACGATCAGCAGCCCCGGCAGCGCCCGCCGCCGGATCTCTTCGGGCAGATCGGGGACAAAGACCGGACCGCGGCT                                                      >  1:567823/1‑101 (MQ=255)
                                                          cCCCGCCACCGGCGTCTCGGGCGTGACGATCAGCAGCCCCGGCAGCGCCCGCCGCCGGATCTCTTCGGGCAGATCGGGGACAAAGACCGGACCGCGGCTGC                                                    <  1:4272458/100‑1 (MQ=255)
                                                             CGCCACCGGCGTCTCGGGCGTGACGATCAGCAGCCCCGGCAGCGCCCGCCGCCGGATCTCTTCGGGCAGATCGGGGACAAAGACCGGACCGCGGCTGCACA                                                 <  2:567771/101‑1 (MQ=255)
                                                                                   ACGATCAGCAGCCCCGGCAGCGCCCGCCGCCGGATCTCTTCGGGCAGATCGGGGACAAAGACCGGACCGCGGCTGCACAGCCACAGCCCGCCCCGCCCCAG                           <  2:3693591/101‑1 (MQ=255)
                                                                                                                                                                                                                 
CGGGGCTCAGATCCCAGATCGCCTGATGGCGCGCGGTGATCAGCGGCACCAGCCCCGGACCCGCCACCGGCGTCTCGGGCGTGACGATCAGCAGCCCCGGCAGCGCCCGC...................................................................................................  >  NC_014034/2073878‑2073987
...................................................................................................GCAGCGCCCGCCGCCGGATCTCTTCGGGCAGATCGGGGACAAAGACCGGACCGCGGCTGCACAGCCACAGCCCGCCCCGCCCCAGCACCTGCGCCAGACCAATCCGCCGC  >  NC_014034/2074009‑2074107

Base quality scores:  ATCG  < 3 ≤  ATCG  < 23 ≤  ATCG  < 29 ≤  ATCG  < 33 ≤  ATCG  < 40 ≤  ATCG