New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	2100920 =	176 (0.840)	2 (0.010)	2/186	34.9	0.01	coding (1209/1365 nt)	RCAP_rcc01941	FAD dependent oxidoreductase
	?	NC_014034	2797168 =	209 (0.920)					intergenic (‑43/‑165)	clpP/RCAP_rcc02610	ATP‑dependent Clp protease proteolytic subunit ClpP/hypothetical protein
Rejected: Position hash score below cutoff.

CGCAATGTCTGCGGCTGGGTCTGGCCGAGGATCTGCGGCTGGAAGGCGCGGTGACGACGCCGCAGGCCTATCCGCTGTATCGCCCGGGCCAGCTTGCCCGGCGCGCG....................................................................................................  <  NC_014034/2101026‑2100920 ....................................................................................................GCGCGCGTCTCTTACCCAAGTCTTAGTGTCGCGCGGCCCCCCCTGCAAGGGCAGCGACTTAAAAGAGAGGAGTTGGAATGATTCTTGGCGATTAATCGGGCGGAAAG  >  NC_014034/2797168‑2797267                                                                                                                                                                                                                                                     GGCTGGAAGGCGCGGTGACGACGCCGCAGGCCTATCCGCTGTATCGCCCGGGCCAGCTTGCCCGGCGCGCGTCTCTTACCCAAGTCTTAGTGTCGCGCGGC                                                                        >  2:1333846/1‑101 (MQ=255)                                                                                TCGCCCGGGCCAGCTTGCCCGGCGCGCGTCTCTTACCCAAGTCTTAGTGTCGCGCGGCCCCCCCTGCAAGGGCAGCGACTTAAAAGAGAGGAGTTGGAATG                             <  1:1333943/101‑1 (MQ=255)                                                                                                                                                                                                                 CGCAATGTCTGCGGCTGGGTCTGGCCGAGGATCTGCGGCTGGAAGGCGCGGTGACGACGCCGCAGGCCTATCCGCTGTATCGCCCGGGCCAGCTTGCCCGGCGCGCG....................................................................................................  <  NC_014034/2101026‑2100920 ....................................................................................................GCGCGCGTCTCTTACCCAAGTCTTAGTGTCGCGCGGCCCCCCCTGCAAGGGCAGCGACTTAAAAGAGAGGAGTTGGAATGATTCTTGGCGATTAATCGGGCGGAAAG  >  NC_014034/2797168‑2797267 Base quality scores:  ATCG  < 3 ≤  ATCG  < 12 ≤  ATCG  < 23 ≤  ATCG  < 29 ≤  ATCG  < 38 ≤  ATCG