New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 = 2233371198 (0.960)2 (0.010) 2/182 34.5 0.01 coding (1137/2772 nt) RCAP_rcc02068 ice nucleation protein repeat family protein
?NC_014034 2473097 = 201 (0.890)coding (14/513 nt) RCAP_rcc02297 GNAT family acetyltransferase
Rejected: Position hash score below cutoff.

CGCATTGACCTGAACCGAGCCGAGGCCCTTGATCGCGCCGGTGCTCAGATCATCGATGGCGCCGGTGGCGATCGCCGCGATCTGACCCGTGCTCATGGCGGCCAGATGC..................................................................................................  >  NC_014034/2233263‑2233371
....................................................................................................GCCAGATGCGCGGGCAGGCTCACCCGAGTTTCTTGACATAGGTCCAGGTCGGCACGCGCGCATTGCGCGCCAGCGACCAGGCCTCGGCATCGCCCAGATAGGCAAAG  >  NC_014034/2473097‑2473194
                                                                                                                                                                                                               
                                        GTGCTCAGATCATCGATGGCGCCGGTGGCGATCGCCGCGATCTGACCCGTGCTCATGGCGGCCAGATGCGCGGGCAGGCTCACCCGAGTTTCGTGACATAG                                                                    >  2:634262/1‑101 (MQ=255)
                                                                               ATCTGACCCGTGCTCATGGCGGCCAGATGCGCGGGCAGGCTCACCCGAGTTTCTTGACATAGGTCCAGGTCGGCACGCGCGCATTGCGCGCCAGCGACCAG                             <  1:634330/101‑1 (MQ=255)
                                                                                                                                                                                                               
CGCATTGACCTGAACCGAGCCGAGGCCCTTGATCGCGCCGGTGCTCAGATCATCGATGGCGCCGGTGGCGATCGCCGCGATCTGACCCGTGCTCATGGCGGCCAGATGC..................................................................................................  >  NC_014034/2233263‑2233371
....................................................................................................GCCAGATGCGCGGGCAGGCTCACCCGAGTTTCTTGACATAGGTCCAGGTCGGCACGCGCGCATTGCGCGCCAGCGACCAGGCCTCGGCATCGCCCAGATAGGCAAAG  >  NC_014034/2473097‑2473194

Base quality scores:  ATCG  < 3 ≤  ATCG  < 7 ≤  ATCG  < 15 ≤  ATCG  < 26 ≤  ATCG  < 38 ≤  ATCG