New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	= 2237342	NA (NA)	6 (0.030)	4/176	31.6	0.05	coding (565/846 nt)	RCAP_rcc02070	ArsR family transcriptional regulator/protein tyrosine phosphatase
	?	NC_014034	= 3563713	226 (1.000)					coding (106/597 nt)	RCAP_rcc03367	hypothetical protein
Rejected: Position hash score below cutoff.

CCCGGGACCGCGATCAACCCTTTCGCGCTCGAGGTGCTGAGCCGCAACGGCCATGACACCGGGGGCCTGCGCGCCAAGCATCTGTCGGAGTTCCAGGGCCCCGCCGCGCCGC....................................................................................................  >  NC_014034/2237243‑2237342 ....................................................................................................CCGCCGCGCCGCTCAGATGCCGAAACGGATCAAGCCCCACCGCCCAGCCCGCAAAGACCAGGATCAGATCCGCGCTGCCCCGCCGCTGCAACCAGTCTGCCCGCATCACAGC  <  NC_014034/3563713‑3563602                                                                                                                                                                                                                                                                        CCATGACACCGGGGGCCTGCGCGCCAAGCATCTGTCGGAGTTCCAGGGCCCCGCCGCGCCGCTCAGATGCCGAAACGGATCAAGCCCCACCGCCCAGCCCG                                                               >  2:2653103/1‑101 (MQ=255)                                                     ATGACACCGGGGGCCTGCGCGCCAAGCATCTGTCGGAGTTCCAGGGCCCCGCCGCGCCGCTCAGATGCCGAAACGGATCAAGCCCCACCGCCCAGCCCGCA                                                             <  1:2653275/101‑1 (MQ=255)                                                                                                 acaCCCGCCGCGCCGCTCAGATGCCGAAACGGATCAAGCCCCACCGCCCAGCCCGCAAAGACCAGGATCAGATCCGCGCTGCCCCGCCGCTGCAACCAGTC                 <  2:375164/98‑1 (MQ=255)                                                                                                  cCCCCGCCGCGCCGCCCAGATGCCGAAACGGATCAAGCCCCACCGCCCAGCCCGCAAAGACCAGGATCAGATCCGCGCTGCCCCGCCGCTGCAACCAGTCT                <  1:1665968/100‑1 (MQ=255)                                                                                                    CCCGCCGCGCCGCTCAGATGCCGAAACGGATCAAGCCCCACCGCCCAGCCCGCAAAGACCAGGATCAGATCCGCGCTGCCCCGCCGCTGCAACCAGTCTGC              <  2:2864954/101‑1 (MQ=255)                                                                                                    CCCGCCGCGCCGCCAAGATGCCGAACCGGATCAAGCCCCACCGCCCAGCCCGCAAAGACCAGGATCAGATCCGCGCTGCCCCGCCGCTGCAACCAGTCTGC              <  2:64207/101‑1 (MQ=255)                                                                                                                                                                                                                      CCCGGGACCGCGATCAACCCTTTCGCGCTCGAGGTGCTGAGCCGCAACGGCCATGACACCGGGGGCCTGCGCGCCAAGCATCTGTCGGAGTTCCAGGGCCCCGCCGCGCCGC....................................................................................................  >  NC_014034/2237243‑2237342 ....................................................................................................CCGCCGCGCCGCTCAGATGCCGAAACGGATCAAGCCCCACCGCCCAGCCCGCAAAGACCAGGATCAGATCCGCGCTGCCCCGCCGCTGCAACCAGTCTGCCCGCATCACAGC  <  NC_014034/3563713‑3563602 Base quality scores:  ATCG  < 3 ≤  ATCG  < 15 ≤  ATCG  < 20 ≤  ATCG  < 30 ≤  ATCG  < 39 ≤  ATCG