New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	= 2238072	NA (NA)	3 (0.010)	3/186	33.7	0.03	coding (446/1008 nt)	gap2	glyceraldehyde‑3‑phosphate dehydrogenase
	?	NC_014034	= 2939783	230 (1.020)					coding (555/711 nt)	RCAP_rcc02750	hypothetical protein
Rejected: Position hash score below cutoff.

GCAAGGTCGTCGTTTCGGCCCCGGTCAAGGATACGGGCGCGCTGAACCTCGTCTATGGCGTGAACCACGTGCTTTACGATGGCAGCCAGCGGCTGATCACGGCGGCG....................................................................................................  >  NC_014034/2237973‑2238072 ....................................................................................................GGCGGCGCGGGTGCAGGTCTATTCCGCCGCGCTGATGGCGATCACCGTCGATACCGAGGCGGAAAAGACCTATCTGCGCAATCTTGCGGCGGCTTTGGCGCTGGATC  <  NC_014034/2939783‑2939677                                                                                                                                                                                                                        CGTCGTTTCGGCCCCGGTCAAGGATACGGGCGCGCTGAACCTCGTCTATGGCGTGAACCACGTGCTTTACGATGGCAGCCAGCGGCTGATCACGGCGGCGC                                                                                                     >  2:1092300/1‑101 (MQ=255)                                                                           gatctTGGCAGCCAGCGGCTGATCACGGCGGCGCGGGTGCAGGTCTATTCCGCCGCGCTGATGGCGATCACCGTCGATACCGAGGCGGAAAAGACCTATCT                                  <  1:1998781/96‑1 (MQ=255)                                                                                TGGCAGCCAGCGGCTGATCACGGCGGCGCGGGTGCAGGTCTATTCCGCCGCGCTGATGGCGATCACCGTCGATACCGAGGCGGAAAAGACCTATCTagatc                             >  2:1998652/1‑96 (MQ=255)                                                                                                                                                                                                                 GCAAGGTCGTCGTTTCGGCCCCGGTCAAGGATACGGGCGCGCTGAACCTCGTCTATGGCGTGAACCACGTGCTTTACGATGGCAGCCAGCGGCTGATCACGGCGGCG....................................................................................................  >  NC_014034/2237973‑2238072 ....................................................................................................GGCGGCGCGGGTGCAGGTCTATTCCGCCGCGCTGATGGCGATCACCGTCGATACCGAGGCGGAAAAGACCTATCTGCGCAATCTTGCGGCGGCTTTGGCGCTGGATC  <  NC_014034/2939783‑2939677 Base quality scores:  ATCG  < 3 ≤  ATCG  < 24 ≤  ATCG  < 29 ≤  ATCG  < 33 ≤  ATCG  < 40 ≤  ATCG