New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 2301348 =207 (0.940)4 (0.020) 3/194 34.4 0.02 intergenic (+46/‑49) sbcC/folD1 exonuclease SbcCD subunit C/bifunctional protein FolD
?NC_014034 3351224 = 254 (1.120)coding (194/750 nt) RCAP_rcc03152 hypothetical protein
Rejected: Position hash score below cutoff.

GCGCTGCTGCACCGCCTTGCCGTCGATGATCCGGTGATCGCGTCTGTCGGCCATGGCGGGTTCCTTCCTTGCTGCGCGGCTTGGCCGATCCTTGCATGCCGCC....................................................................................................  <  NC_014034/2301450‑2301348
....................................................................................................GCCCCCGCCACCCACGAAAATACTTTTCTTGCCGCACCTTTATTCTCACTCTGAAAATTGCTATAAAGTTTGAAGTAAACATAGTGCGTAACGCTTGCTTCAT  >  NC_014034/3351224‑3351323
                                                                                                                                                                                                           
            CGCCTTGCCGTCGATGATCCGGTGATCGCGTCTGTCGGCCATGGCGGGTTCCTTCCTTGCTGCGCGGCTTGGCCGATCCTTGCATGCCGCCCCCGCCGCCC                                                                                            >  1:3895621/1‑101 (MQ=255)
             GCCTTGCCGTCGATGATCCGGTGATCGCGTCTGTCGGCCATGGCGGGGTCCTTCCTTGCTGCGCGGCTTGGCCGATCCTTTCATGCCGCCCCCGCCCCCCc                                                                                           >  2:3231692/1‑100 (MQ=255)
                                                                    TTGCTGCGCGGCTTGGCCGATCCTTGCATGCCGCCCCCGCCACCCACGAAAATACTTTTCTTGCCGCACCTTTATTCTCACTCTGAAAATTGCTATAAAGT                                    <  2:687982/101‑1 (MQ=255)
                                                                     TGCTGCGCGGCTTGGCCGATCCTTGCATGCCGCCCCCGCCACCCACGAAAATACTTTTCTTGCCGCACCTTTATTCTCACTCTGAAAATTGCTATAAAGTa                                   >  1:688062/1‑100 (MQ=255)
                                                                                                                                                                                                           
GCGCTGCTGCACCGCCTTGCCGTCGATGATCCGGTGATCGCGTCTGTCGGCCATGGCGGGTTCCTTCCTTGCTGCGCGGCTTGGCCGATCCTTGCATGCCGCC....................................................................................................  <  NC_014034/2301450‑2301348
....................................................................................................GCCCCCGCCACCCACGAAAATACTTTTCTTGCCGCACCTTTATTCTCACTCTGAAAATTGCTATAAAGTTTGAAGTAAACATAGTGCGTAACGCTTGCTTCAT  >  NC_014034/3351224‑3351323

Base quality scores:  ATCG  < 3 ≤  ATCG  < 31 ≤  ATCG  < 33 ≤  ATCG  < 35 ≤  ATCG  < 41 ≤  ATCG