New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 2343616 =157 (0.730)2 (0.010) 2/190 35.3 0.01 coding (154/2019 nt) RCAP_rcc02172 hypothetical protein
?NC_014034 2343645 = 176 (0.780)coding (183/2019 nt) RCAP_rcc02172 hypothetical protein
Rejected: Position hash score below cutoff.

CGCCAGCGCCGCAAAGGATGCGACGGTCGCCGCCAGCGCCAGACCCCAGGACAGCGCATCGACCCGCGTCAGCGCCGCCAGAATCGCCGCCCCGTCAAAGCTGGC...................................................................................................  <  NC_014034/2343720‑2343616
....................................................................................................CTGGCGGCGCTGACGCGGGTCGATGCGCTGTCCTGGGGTCTGGCGCTGGCGGCGACCGTCGCATCCTTTGCGGCGCTGGCGCAATATGACGCGCTGATCCACCG  >  NC_014034/2343645‑2343743
                                                                                                                                                                                                            
                           CGCCGCCAGCGCCAGACCCCAGGACAGCGCATCGACCCGCGTCAGCGCCGCCAGAATCGCCGCCCCGTCAAAGCTGGCGGCGCTGACGCGGGTCGATGCGC                                                                              >  1:1370019/1‑101 (MQ=255)
                           CGCCGCCAGCGCCAGACCCCAGGACAGCGCATCGACCCGCGTCAGCGCCGCCAGAATCGCCGCCCCGTCAAAGCTGGCGGCGCTGACGCGGGTCGATGCGC                                                                              <  2:1369922/101‑1 (MQ=255)
                                                                                                                                                                                                            
CGCCAGCGCCGCAAAGGATGCGACGGTCGCCGCCAGCGCCAGACCCCAGGACAGCGCATCGACCCGCGTCAGCGCCGCCAGAATCGCCGCCCCGTCAAAGCTGGC...................................................................................................  <  NC_014034/2343720‑2343616
....................................................................................................CTGGCGGCGCTGACGCGGGTCGATGCGCTGTCCTGGGGTCTGGCGCTGGCGGCGACCGTCGCATCCTTTGCGGCGCTGGCGCAATATGACGCGCTGATCCACCG  >  NC_014034/2343645‑2343743

Base quality scores:  ATCG  < 3 ≤  ATCG  < 20 ≤  ATCG  < 29 ≤  ATCG  < 33 ≤  ATCG  < 41 ≤  ATCG