New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 = 235468204 (0.900)2 (0.010) 2/200 36.2 0.01 coding (338/441 nt) RCAP_rcc00200 MarR family transcriptional regulator
?NC_014034 235515 = 171 (0.760)coding (385/441 nt) RCAP_rcc00200 MarR family transcriptional regulator
Rejected: Position hash score below cutoff.

ATGCGCGGCGCAAGTTCGTGGCGATCTCGCCCGCGGGGCGGCAGGCGCGGGATGCCGCGCTGGCCTCCTT.....................................  >  NC_014034/235399‑235468
......................................................................GTCCGCGCCGCCTTGCCCGTGCTGCGCGAATTGCGGC  >  NC_014034/235515‑235551
                                                                                                           
ATGCGCGGCGCAAGTTCGTGGCGATCTCGCCCGCGGGGCGGCAGGCGCGGGATGCCGCGCTGGCCTCCTTGTCGGCGCCGCCTTGCCCGTGCTGCGCGAAT        >  2:2209418/1‑101 (MQ=255)
      GGCGCAAGTTCGTGGCGATCTCGCCCGCGGGGCGGCAGGCGCGGGATGCCGCGCTGGCCTCCTTGTCGGCGCCGCCTTGCCCGTGCTGCGCGAATTGCGGC  <  1:2209557/101‑1 (MQ=255)
                                                                                                           
ATGCGCGGCGCAAGTTCGTGGCGATCTCGCCCGCGGGGCGGCAGGCGCGGGATGCCGCGCTGGCCTCCTT.....................................  >  NC_014034/235399‑235468
......................................................................GTCCGCGCCGCCTTGCCCGTGCTGCGCGAATTGCGGC  >  NC_014034/235515‑235551

Base quality scores:  ATCG  < 3 ≤  ATCG  < 12 ≤  ATCG  < 20 ≤  ATCG  < 27 ≤  ATCG  < 37 ≤  ATCG