New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 = 2372543194 (0.900)2 (0.010) 2/190 35.3 0.01 coding (409/1053 nt) RCAP_rcc02197 two component AraC family transcriptional regulator
?NC_014034 3307648 = 205 (0.910)coding (582/744 nt) gcvT2 glycine cleavage T protein
Rejected: Position hash score below cutoff.

TGGCCGTGCAGCGTCTCGATCTGCCGCCGCACCAGCGCCAGACCGTCGCGATAGGCATGGGCGGCGACCATCCGGCCCAGCTCGGTGCGCAGATCGGGGGCGGC....................................................................................................  >  NC_014034/2372440‑2372543
...................................................................................................GCGGCGCCGGTGGGCACGCCGATCGGGGCGGGCGGCAAGACCGTCGGCACGCTTTACACGCAATCGGGCGGCAAGGCGCTGGCGCAGCTGCGGCTGGATGCGCTG  >  NC_014034/3307648‑3307747
                                                                                                                                                                                                            
                                              CGCGATAGGCATGGGCGGCGACCATCCGGCCCAGCTCGGTGCGCAGATCGGGGGCGGCGCCGGTGGGCACGCCGATCGGGGCGGGCGGCAAGACCGTCGGC                                                           >  2:983317/1‑101 (MQ=255)
                                                 GATAGGCATGGGCGGCGACCATCCGGCCCAGCTCGGTGCGCAGATCGGGGGCGGCGCCGGTGGGCACGCCGATCGGGGCGGGCGGCAAGACCGTCGGCACG                                                        <  1:983402/101‑1 (MQ=255)
                                                                                                                                                                                                            
TGGCCGTGCAGCGTCTCGATCTGCCGCCGCACCAGCGCCAGACCGTCGCGATAGGCATGGGCGGCGACCATCCGGCCCAGCTCGGTGCGCAGATCGGGGGCGGC....................................................................................................  >  NC_014034/2372440‑2372543
...................................................................................................GCGGCGCCGGTGGGCACGCCGATCGGGGCGGGCGGCAAGACCGTCGGCACGCTTTACACGCAATCGGGCGGCAAGGCGCTGGCGCAGCTGCGGCTGGATGCGCTG  >  NC_014034/3307648‑3307747

Base quality scores:  ATCG  < 3 ≤  ATCG  < 25 ≤  ATCG  < 31 ≤  ATCG  < 34 ≤  ATCG  < 41 ≤  ATCG