New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 = 2469944207 (0.920)2 (0.010) 2/198 36.0 0.01 coding (124/1008 nt) RCAP_rcc02294 signal transduction histidine kinase
?NC_014034 2470007 = 226 (1.000)coding (61/1008 nt) RCAP_rcc02294 signal transduction histidine kinase
Rejected: Position hash score below cutoff.

GCCACCCCGCCCGACACCAGCGCGGTCAGAATGCCCGCGCGGGTCGACAGGAAAAACCCGACAAGGAAGACAAGCGGAAAGAAGGTCAGGAACGGGTAGCC....................................................................................................  >  NC_014034/2469844‑2469944
....................................................................................................CTGCCCCCCCATTCGACAGTCGGGCCGCGCGGTCGGTTGGTCAGGGCACGCAGGAGTTTCATTTCACCAATCGAAAGATGTTTCCGCAATGCTTATTCAGC  >  NC_014034/2470007‑2470106
                                                                                                                                                                                                         
                                                   AAAAACCCGACAAGGAAGACAAGCGGAAAGAAGGTCAGGAACGGGCAGCCTGCCCCCCCATTCGACAGTCGGGCCGCGCGGTCGGTTGGTCAGGGCACGCA                                                   >  2:2301861/1‑101 (MQ=255)
                                                                 GAAGACAAGCGGAAAGAAGGTCAGGAACGGGCAGCCTGCCCCCCCATTCGACAGTCGGGCCGCGCGGTCGGTTGGTCAGGGCACGCAGGAGTTTCATTTCA                                     <  1:2302006/101‑1 (MQ=255)
                                                                                                                                                                                                         
GCCACCCCGCCCGACACCAGCGCGGTCAGAATGCCCGCGCGGGTCGACAGGAAAAACCCGACAAGGAAGACAAGCGGAAAGAAGGTCAGGAACGGGTAGCC....................................................................................................  >  NC_014034/2469844‑2469944
....................................................................................................CTGCCCCCCCATTCGACAGTCGGGCCGCGCGGTCGGTTGGTCAGGGCACGCAGGAGTTTCATTTCACCAATCGAAAGATGTTTCCGCAATGCTTATTCAGC  >  NC_014034/2470007‑2470106

Base quality scores:  ATCG  < 3 ≤  ATCG  < 29 ≤  ATCG  < 33 ≤  ATCG  < 35 ≤  ATCG  < 41 ≤  ATCG