New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 = 248785205 (0.990)2 (0.010) 2/184 34.7 0.01 coding (333/2526 nt) infB translation initiation factor IF
?NC_014034 2306781 = 211 (0.930)coding (794/2808 nt) RCAP_rcc02139 methyl‑accepting chemotaxis protein
Rejected: Position hash score below cutoff.

GCCGTCTGAGGGCGCTGCAGGCCGCGAAGATCCGCGAGGTCGAAGAGGCCGCGCAACGTGTCGCCGAGGAAAAGGCGCGCGAGGAAGAACGCGAACGCCGCCGCGCC....................................................................................................  >  NC_014034/248679‑248785
...................................................................................................GCCGCGCCAGATCGCGGGCCAGACCGGCCAGACGGGCCAGATCGGCGCGCAGCGGCGCCAGCGGGCCCGTCGGCTCGATGGCGACGATCTTGTCCTGCATCCGGCTTT  >  NC_014034/2306781‑2306880
                                                                                                                                                                                                               
                                          AAGAGGCCGCGCAACGTGTCGCCGAGGAAAAGGCGCGCGAGGAAGAACGCGAACGCCGCCGCGCCAGATCGCGGGCCAGACCGGCCAGACGGGCCAGATCG                                                                  >  1:277075/1‑101 (MQ=255)
                                                                     AAAAGGCGCGCGAGGAAGAACGCGAACGCCGCCGCGCCAGATCGCGGGCCAGACCGGCCAGACGGGCCAGATCGGCGCGCAGCGGCGCCAGCGGGCCCGTC                                       <  2:277040/101‑1 (MQ=255)
                                                                                                                                                                                                               
GCCGTCTGAGGGCGCTGCAGGCCGCGAAGATCCGCGAGGTCGAAGAGGCCGCGCAACGTGTCGCCGAGGAAAAGGCGCGCGAGGAAGAACGCGAACGCCGCCGCGCC....................................................................................................  >  NC_014034/248679‑248785
...................................................................................................GCCGCGCCAGATCGCGGGCCAGACCGGCCAGACGGGCCAGATCGGCGCGCAGCGGCGCCAGCGGGCCCGTCGGCTCGATGGCGACGATCTTGTCCTGCATCCGGCTTT  >  NC_014034/2306781‑2306880

Base quality scores:  ATCG  < 3 ≤  ATCG  < 20 ≤  ATCG  < 23 ≤  ATCG  < 31 ≤  ATCG  < 40 ≤  ATCG