New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 2506244 =261 (1.240)2 (0.010) 2/186 34.9 0.01 coding (430/594 nt) RCAP_rcc02333 hypothetical protein
?NC_014034 2506259 = 259 (1.150)coding (445/594 nt) RCAP_rcc02333 hypothetical protein
Rejected: Position hash score below cutoff.

AGAACAAACGCAAGAGCAGATATTGCAACAGACATAGAGGAAACAATCGACCACCTTCTGTGGGCGCTCCAAGAACGTTCAGCCAGGTCATGAAATCTCTGAGATTT....................................................................................................  <  NC_014034/2506350‑2506244
....................................................................................................GAGATTTCATGACCTGGCTGAACGTTCTTGGAGCGCCCACAGAAGGTGGTCGATTGTTTCCTCTATGTCTGTTGCAATATCTGCTCTTGCGTTTGTTCTTGGCTTCC  >  NC_014034/2506259‑2506358
                                                                                                                                                                                                               
                              atctTAGAGGAAACAATCGACCACCTTCTGTGGGCGCTCCAAGAACGTTCAGCCAGGTCATGAAATCTCTGAGATTTCATGACCTGGCTGAACGTTCTTGG                                                                              <  2:2228220/97‑1 (MQ=18)
                                  TAGAGGAAACAATCGACCACCTTCTGTGGGCGCTCCAAGAACGTTCAGCCAGGTCATGAAATCTCTGAGATTTCATGACCTGGCTGAACGTTCTTGGAGat                                                                          >  1:2228365/1‑99 (MQ=17)
                                                                                                                                                                                                               
AGAACAAACGCAAGAGCAGATATTGCAACAGACATAGAGGAAACAATCGACCACCTTCTGTGGGCGCTCCAAGAACGTTCAGCCAGGTCATGAAATCTCTGAGATTT....................................................................................................  <  NC_014034/2506350‑2506244
....................................................................................................GAGATTTCATGACCTGGCTGAACGTTCTTGGAGCGCCCACAGAAGGTGGTCGATTGTTTCCTCTATGTCTGTTGCAATATCTGCTCTTGCGTTTGTTCTTGGCTTCC  >  NC_014034/2506259‑2506358

Base quality scores:  ATCG  < 3 ≤  ATCG  < 22 ≤  ATCG  < 28 ≤  ATCG  < 32 ≤  ATCG  < 40 ≤  ATCG