New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 = 2531206198 (0.960)2 (0.010) 2/182 34.5 0.01 coding (1995/2154 nt) RCAP_rcc02362 competence protein
?NC_014034 2732980 = 210 (0.930)coding (347/2757 nt) RCAP_rcc02540 diguanylate cyclase/phosphodiesterase
Rejected: Position hash score below cutoff.

CGGCGTCTTGCGCTGCGGCGGATCGGTCCAGAGCCTTTGCCCCGCCTCCTCCCGCGCGCGGCGGATCTGCCCCGACACCTCGAAAGAAAGCGCCCCGGTCCGCGCCAGG....................................................................................................  >  NC_014034/2531098‑2531206
....................................................................................................CGCGCCAGGATGCCGGAGGTGCGCAGCCACAGGACCCCGTGGCGGTCGACGAAGCTTTCCCAGTCGCAGCCCCCCGCCGCATCCAGCGCCCCGCGCAGCCGGTCCTCGG  >  NC_014034/2732980‑2733079
                                                                                                                                                                                                                 
                                                                       CCGACACCTCGAAAGAAAGCGCCCCGGTCCGCGCCAGGATGCCGGAGGTGCGCAGCCACAGGACCCCGTGGCGGTCGACGAAGCTTTCCCAGTCGCAGGCC                                       >  2:2740660/1‑101 (MQ=255)
                                                                         GACACCTCGAAAGAAAGCGCCCCGGTCCGCGCCAGGATGCCGGAGGTGCGCAGCCACAGGACCCCGTGGCGGTCGACGAAGCTTTCCCAGTCGCAGCCCCC                                     <  1:2740850/101‑1 (MQ=255)
                                                                                                                                                                                                                 
CGGCGTCTTGCGCTGCGGCGGATCGGTCCAGAGCCTTTGCCCCGCCTCCTCCCGCGCGCGGCGGATCTGCCCCGACACCTCGAAAGAAAGCGCCCCGGTCCGCGCCAGG....................................................................................................  >  NC_014034/2531098‑2531206
....................................................................................................CGCGCCAGGATGCCGGAGGTGCGCAGCCACAGGACCCCGTGGCGGTCGACGAAGCTTTCCCAGTCGCAGCCCCCCGCCGCATCCAGCGCCCCGCGCAGCCGGTCCTCGG  >  NC_014034/2732980‑2733079

Base quality scores:  ATCG  < 3 ≤  ATCG  < 15 ≤  ATCG  < 22 ≤  ATCG  < 30 ≤  ATCG  < 38 ≤  ATCG