New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 2579846 =219 (1.040)2 (0.010) 2/186 34.9 0.01 coding (326/1611 nt) pgi glucose‑6‑phosphate isomerase
?NC_014034 = 2881075 186 (0.820)coding (510/1053 nt) pdxA 4‑hydroxythreonine‑4‑phosphate dehydrogenase
Rejected: Position hash score below cutoff.

TTCGCGGGCGAAAAGATCAACGAGACCGAGGGCCGGGCGGTGCTGCACATGGCCTGGCGCAACTTCCGCGACACGATCACGGTCGATGGCCACGACGTCATGCCCGC....................................................................................................  <  NC_014034/2579952‑2579846
....................................................................................................TGCCCGCGACGATCCACATCGCCCTGCGCGAGGTCTTCGACACCTATACGCCCGCGCTTCTGCGCGAGGTGGTGCGGCTGACCGCCGAGGGGCTGCGGCGCGATTTC  <  NC_014034/2881075‑2880976
                                                                                                                                                                                                               
                                                                        ACGATCACGGTCGATGGCCACGACGTCATGCCCGCGACGATCCACATCGCCCTGCGCGAGGTCTTCGACACCTATACGCCCGCGCTTCTGCGCGAGGTGGT                                    <  1:3355263/101‑1 (MQ=255)
                                                                        ACGATCACGGTCGATGGCCACGACGTCATGCCCGCGACGATCCACATCGCCCTGCGCGAGGTCTTCGACACCTATACGCCCGCGCTTCTGCGCGAGGTGGT                                    >  2:3355026/1‑101 (MQ=255)
                                                                                                                                                                                                               
TTCGCGGGCGAAAAGATCAACGAGACCGAGGGCCGGGCGGTGCTGCACATGGCCTGGCGCAACTTCCGCGACACGATCACGGTCGATGGCCACGACGTCATGCCCGC....................................................................................................  <  NC_014034/2579952‑2579846
....................................................................................................TGCCCGCGACGATCCACATCGCCCTGCGCGAGGTCTTCGACACCTATACGCCCGCGCTTCTGCGCGAGGTGGTGCGGCTGACCGCCGAGGGGCTGCGGCGCGATTTC  <  NC_014034/2881075‑2880976

Base quality scores:  ATCG  < 3 ≤  ATCG  < 15 ≤  ATCG  < 22 ≤  ATCG  < 30 ≤  ATCG  < 39 ≤  ATCG