New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 2603553 =179 (0.880)2 (0.010) 2/180 34.3 0.01 coding (982/1251 nt) RCAP_rcc02427 M23 family peptidase
?NC_014034 3733272 = 198 (0.880)coding (2388/2811 nt) RCAP_rcc03528 hypothetical protein
Rejected: Position hash score below cutoff.

AGCAGCCCGCCCTCGTGGCGCAAAACCAGGATCGGCACCTGTTCGGTGTCCTTGGTGATCGCCGCGACTGTGCCCGCATCGGCGGCCTTGACCGCGGTTCCGGCGGCGGC....................................................................................................  <  NC_014034/2603662‑2603553
....................................................................................................CGGCGGCGGCACATCGGGCCGCCAGCCCGCATGCGATCGCCCATCAGATGTCACAGGCCCTGGCCGATGCCGGAAACCGGACCGTCGAACTGACCCTGTCCCCCGAGGAA  >  NC_014034/3733272‑3733371
                                                                                                                                                                                                                  
                                 ctCACCTGTTCGGTGTCCTTGGTGATCGCCGCGACTGTGCCCGCATCGGCGGCCTTGACCGCGGTTCCGGCGGCGGCACATCGGGCCGCCAGCCCGCATGC                                                                              <  1:2245100/99‑1 (MQ=255)
                                   CACCTGTTCGGTGTCCTTGGTGATCGCCGCGACTGTGCCCGCATCGGCGGCCTTGACCGCGGTTCCGGCGGCGGCACATCGGGCCGCCAGCCCGCATGCag                                                                            >  2:2244955/1‑99 (MQ=255)
                                                                                                                                                                                                                  
AGCAGCCCGCCCTCGTGGCGCAAAACCAGGATCGGCACCTGTTCGGTGTCCTTGGTGATCGCCGCGACTGTGCCCGCATCGGCGGCCTTGACCGCGGTTCCGGCGGCGGC....................................................................................................  <  NC_014034/2603662‑2603553
....................................................................................................CGGCGGCGGCACATCGGGCCGCCAGCCCGCATGCGATCGCCCATCAGATGTCACAGGCCCTGGCCGATGCCGGAAACCGGACCGTCGAACTGACCCTGTCCCCCGAGGAA  >  NC_014034/3733272‑3733371

Base quality scores:  ATCG  < 3 ≤  ATCG  < 29 ≤  ATCG  < 33 ≤  ATCG  < 35 ≤  ATCG  < 41 ≤  ATCG