New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 = 2623859220 (0.970)2 (0.010) 2/200 36.2 0.01 coding (336/717 nt) livF2 branched‑chain amino acid ABC transporter ATP‑binding protein LivF
?NC_014034 = 3301888 196 (0.870)coding (321/786 nt) RCAP_rcc03106 enoyl‑CoA hydratase/isomerase
Rejected: Position hash score below cutoff.

GTCAGGGACAATCTGCTGATGGGCGCTTTCACCCGCTCCGACACGGCCGGGATCGCG....................................................  >  NC_014034/2623803‑2623859
.........................................................GGCGCTGCACGGCGTCGTCTTCGGCGCCGGGCTGCAGCTGGCCGCCGGGGCC  <  NC_014034/3301888‑3301837
                                                                                                             
GTCAGGGACAATCTGCTGATGGGCGCTTTCACCCGCTCCGACACGGCCGGGATCGC.GGCGCTGCACGGCGTCGTCTTCGGCGCCGGGCTGCAGCTGGCCGC         >  2:3337841/1‑101 (MQ=255)
       ACAATCTGCTGATGGGCGCTTTCACCCGCTCCGACACGGCCGGGATCGC.GGCGCTGCACGGCGTCGTCTTCGGCGCCGGGCTGCAGCTGGCCGCCGGGGCC  <  1:3338078/101‑1 (MQ=255)
                                                                                                             
GTCAGGGACAATCTGCTGATGGGCGCTTTCACCCGCTCCGACACGGCCGGGATCGCG....................................................  >  NC_014034/2623803‑2623859
.........................................................GGCGCTGCACGGCGTCGTCTTCGGCGCCGGGCTGCAGCTGGCCGCCGGGGCC  <  NC_014034/3301888‑3301837

Base quality scores:  ATCG  < 3 ≤  ATCG  < 20 ≤  ATCG  < 26 ≤  ATCG  < 33 ≤  ATCG  < 40 ≤  ATCG