New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 2669297 =175 (0.830)2 (0.010) 2/186 34.9 0.01 coding (351/663 nt) RCAP_rcc02485 type 12 family methyltransferase
?NC_014034 3112374 = 212 (0.940)coding (245/438 nt) RCAP_rcc02916 hypothetical protein
Rejected: Position hash score below cutoff.

GTGATCTGATGCTGGCGGGCCATGCGGCCGAGCTGGCGGACCCGGCGCGGCTTGACCCCGCGCAGCTGATCGAGGATGACGCCTTCGCCTTTCCGGGCGTGCCCGAG...................................................................................................  <  NC_014034/2669403‑2669297
....................................................................................................GCCCGAGACATCCCCCGCCTTGACCGTCAGGACGACCGAATAAAGCCGCTCGATCGACTGGACATAGGCGCCGGTGCGGGACGCCTGCGGTCCGCCCTTGATCCCG  >  NC_014034/3112374‑3112472
                                                                                                                                                                                                              
                                     GGACCCGGCTCGGCTTGACCCCGCGCAGCTGATCGAGGATGACGCCTTCGCCTTTCCGGGCGTGCCCGAGACATCCCCCGCCTTGACCGTCCGGACGACCG                                                                      >  1:2426868/1‑101 (MQ=255)
                                           GGCTCGGCTTGACCCCGCGCAGCTGATCGAGGATGACGCCTTCGCCTTTCCGGGCGTGCCCGAGACATCCCCCGCCTTGACCGTCAGGACGACCGAATAAA                                                                <  2:2426711/101‑1 (MQ=255)
                                                                                                                                                                                                              
GTGATCTGATGCTGGCGGGCCATGCGGCCGAGCTGGCGGACCCGGCGCGGCTTGACCCCGCGCAGCTGATCGAGGATGACGCCTTCGCCTTTCCGGGCGTGCCCGAG...................................................................................................  <  NC_014034/2669403‑2669297
....................................................................................................GCCCGAGACATCCCCCGCCTTGACCGTCAGGACGACCGAATAAAGCCGCTCGATCGACTGGACATAGGCGCCGGTGCGGGACGCCTGCGGTCCGCCCTTGATCCCG  >  NC_014034/3112374‑3112472

Base quality scores:  ATCG  < 3 ≤  ATCG  < 8 ≤  ATCG  < 20 ≤  ATCG  < 29 ≤  ATCG  < 38 ≤  ATCG