New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 = 2714312199 (0.960)3 (0.020) 2/184 23.6 0.02 coding (360/1452 nt) dht dihydropyrimidinase
?NC_014035 = 7024 147 (1.120)intergenic (‑128/+42) frlC/RCAP_rcp00009 protein FrlC/LacI family transcriptional regulator
Rejected: Position hash score below cutoff.

ATCAGGCTGCCCTTGTAGGCGAGGAAATGCTTGAACGAGGTGATGCCGCGTTCGACCACCTTCGGCATCTCGTCAAAGACTTGCTGCCCCCACCAGGTCACGGCCATG....................................................................................................  >  NC_014034/2714205‑2714312
....................................................................................................CGGCCATGCGTTACATCGATGTGAGATCGGTCTCTCATGCAGTCGACCGATCCTTTCCCAAGACATCCGGGATCGGCGCCGTTCCGGTTCCGGTTGCGGCGGCACCCC  <  NC_014035/7024‑6925
                                                                                                                                                                                                                
        GCCCTTGTAGGCGAGGAAATGCTTGAACGAGGTGATGCCGCGTTCGACCACCTTCGGCATCTCGTCAAAGACTTGCTGCCCCCACCAGGTCACGGCCAAGC                                                                                                     <  2:1312379/101‑1 (MQ=255)
                                       gatcTGCCGCGTTCGACCACCTTCGGCATCTCGTCAAAGACTTGCTGCCCCCACCAGGTCACGGCCATGCGTTACATCGATGTGAGATCGGTCTCTCATGC                                                                      <  1:59095/97‑1 (MQ=255)
                                            GCCGCGTTCGACCACCTTCGGCATCTCGTCAAAGACTTGCTGCCCCCACCAGGTCACGGCCATGCGTTACATCGATGTGAGATCGGTCTCTCATGCAGatc                                                                 >  2:59082/1‑98 (MQ=255)
                                                                                                                                                                                                                
ATCAGGCTGCCCTTGTAGGCGAGGAAATGCTTGAACGAGGTGATGCCGCGTTCGACCACCTTCGGCATCTCGTCAAAGACTTGCTGCCCCCACCAGGTCACGGCCATG....................................................................................................  >  NC_014034/2714205‑2714312
....................................................................................................CGGCCATGCGTTACATCGATGTGAGATCGGTCTCTCATGCAGTCGACCGATCCTTTCCCAAGACATCCGGGATCGGCGCCGTTCCGGTTCCGGTTGCGGCGGCACCCC  <  NC_014035/7024‑6925

Base quality scores:  ATCG  < 3 ≤  ATCG  < 31 ≤  ATCG  < 34 ≤  ATCG  < 35 ≤  ATCG  < 41 ≤  ATCG