New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	= 2792380	255 (1.230)	3 (0.010)	3/184	33.5	0.01	coding (674/708 nt)	RCAP_rcc02603	hypothetical protein
	?	NC_014034	= 3080010	240 (1.060)					coding (67/957 nt)	RCAP_rcc02883	DeoR family transcriptional regulator
Rejected: Position hash score below cutoff.

CGATCCACTGGCTCGAGAAATGGCTGGCCAAGACCTACGGCTGACGAAAGCGCCCCCGCAAGGGGGCGTTTTCAGCTCTTCGGCCGCAGCACGCAGGTGGCGCGGC....................................................................................................  >  NC_014034/2792275‑2792380 ..................................................................................................GGCGCGGCTGATCTGTTCGATCTCTTCCGCATCCAGCGCGAAACCGCTGTCCTGTGCTGACGTGATCTCGCTCATCGTCTGCTCCTCCTGTCGGTCAAAGGATCACTT  <  NC_014034/3080010‑3079911                                                                                                                                                                                                                                                       atctACGAAAGCGCCCCCGCAAGGGGGCGTTTTCAGCTCTTCGGCCGCAGCACGCAGGTGGCGCGGCTGATCTGTTCGATCTCTTCCGCATCCAGCGCGAA                                                                    <  1:4238877/97‑1 (MQ=255)                                            ACGAAAGCGCCCCCGCAAGGGGGCGTTTTCAGCTCTTCGGCCGCAGCACGCAGGTGGCGCGGCTGATCTGTTCGATCTCTTCCGCATCCAGCGCGAAAgat                                                                >  2:4238616/1‑98 (MQ=255)                                                                                              gatcTGGCGCGGCTGATCTGTTCGATCTCTTCCGCATCCAGCGCGAAACCGCTGTCCTGTGCTGACGTGATCTCGCTCATCGTCTGCTCCTCCTGTCGGTC              <  1:40536/97‑1 (MQ=255)                                                                                                                                                                                                                CGATCCACTGGCTCGAGAAATGGCTGGCCAAGACCTACGGCTGACGAAAGCGCCCCCGCAAGGGGGCGTTTTCAGCTCTTCGGCCGCAGCACGCAGGTGGCGCGGC....................................................................................................  >  NC_014034/2792275‑2792380 ..................................................................................................GGCGCGGCTGATCTGTTCGATCTCTTCCGCATCCAGCGCGAAACCGCTGTCCTGTGCTGACGTGATCTCGCTCATCGTCTGCTCCTCCTGTCGGTCAAAGGATCACTT  <  NC_014034/3080010‑3079911 Base quality scores:  ATCG  < 3 ≤  ATCG  < 29 ≤  ATCG  < 33 ≤  ATCG  < 35 ≤  ATCG  < 41 ≤  ATCG