New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	2897218 =	222 (1.020)	2 (0.010)	2/192	35.5	0.01	coding (292/381 nt)	RCAP_rcc02706	hypothetical protein
	?	NC_014034	= 3537478	188 (0.830)					coding (716/1383 nt)	RCAP_rcc03345	XRE family transcriptional regulator
Rejected: Position hash score below cutoff.

CCATGGCGCGGCCGAGATCGCGCGGCTGGCGCGGCAGGTCGGCATGGTGCTTCTGGCCCGGGTGGCGCAGGATCTGCGCGATTGTGTCACGCGGGGCGATGCGG...................................................................................................  <  NC_014034/2897321‑2897218 ....................................................................................................GCGGCGACGCAGCTGGACCCCGAGGCGCAGGCGCTGTTGCGGGTGGGGCTGGCGAATTATTATGCCGGTGCGCTGATCATGCCTTACCGCGCCTTTCTGGCCG  <  NC_014034/3537478‑3537380                                                                                                                                                                                                                                                                     CCCGGGTGGCGCAGGATCTGCGCGATTGTGTCACGCGGGGCGATGCGGCGACGCAGCTGGACCCCGAGGCGCAGGCGCTGTTGCGGGTGGGGCTGGCGAAT                                                >  2:3829192/1‑101 (MQ=255)                                                             GGTGGCGCAGGATCTGCGCGATTGTGTCACGCGACGCGATGCGGCGACGCAGCTGGACCCCGAGGCGCAGGCGCTGTTGCGGGTGGGGCTGGCGAATTATT                                            <  1:3829445/101‑1 (MQ=255)                                                                                                                                                                                                             CCATGGCGCGGCCGAGATCGCGCGGCTGGCGCGGCAGGTCGGCATGGTGCTTCTGGCCCGGGTGGCGCAGGATCTGCGCGATTGTGTCACGCGGGGCGATGCGG...................................................................................................  <  NC_014034/2897321‑2897218 ....................................................................................................GCGGCGACGCAGCTGGACCCCGAGGCGCAGGCGCTGTTGCGGGTGGGGCTGGCGAATTATTATGCCGGTGCGCTGATCATGCCTTACCGCGCCTTTCTGGCCG  <  NC_014034/3537478‑3537380 Base quality scores:  ATCG  < 3 ≤  ATCG  < 24 ≤  ATCG  < 33 ≤  ATCG  < 35 ≤  ATCG  < 41 ≤  ATCG