New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	3098327 =	209 (1.000)	2 (0.010)	2/184	34.7	0.01	coding (1296/1782 nt)	RCAP_rcc02898	ABC transporter ATP‑binding/permease
	?	NC_014034	= 3700842	245 (1.080)					coding (1034/1062 nt)	hrcA	heat‑inducible transcription repressor HrcA
Rejected: Position hash score below cutoff.

CCGCGGCGATCAGCTCGGCGTCACTCGCCTCGGGGCGGGCAAAGCGCAGGTTTTCCGCCACCGAGGCATGCAGCAGATAGGGTTCCTGCGAGACCACGCCCAGCATC....................................................................................................  <  NC_014034/3098433‑3098327 ...................................................................................................CCAGCATCCGCCCGACCAGTTGCGCCGTATAATCCACGATCGGCACGATCCGCCCGTAGTTGAGCCGGGTGGGGCCGATGACCCCCACCGCGCCGATGATCTTTCGAT  <  NC_014034/3700842‑3700743                                                                                                                                                                                                                                                GGGGCGGGCAAAGCGCAGGTTTTCCGCCACCGAGGCATGCAGCAGATAGGGTTCCTGCGAGACCACGCCCAGCATCCGCCCGACCAGTTGCGCCGTATAAT                                                                             >  1:1424286/1‑101 (MQ=255)                                GGGGCGGGCAAAGCGCAGGTTTTCCGCCACCGAGGCATGCAGCAGATAGGGTTCCTGCGAGACCACGCCCAGCATCCGCCCGACCAGTTGCGCCGTATAAT                                                                             <  2:1424179/101‑1 (MQ=255)                                                                                                                                                                                                                 CCGCGGCGATCAGCTCGGCGTCACTCGCCTCGGGGCGGGCAAAGCGCAGGTTTTCCGCCACCGAGGCATGCAGCAGATAGGGTTCCTGCGAGACCACGCCCAGCATC....................................................................................................  <  NC_014034/3098433‑3098327 ...................................................................................................CCAGCATCCGCCCGACCAGTTGCGCCGTATAATCCACGATCGGCACGATCCGCCCGTAGTTGAGCCGGGTGGGGCCGATGACCCCCACCGCGCCGATGATCTTTCGAT  <  NC_014034/3700842‑3700743 Base quality scores:  ATCG  < 3 ≤  ATCG  < 31 ≤  ATCG  < 33 ≤  ATCG  < 35 ≤  ATCG  < 39 ≤  ATCG