New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 = 311696215 (1.090)2 (0.010) 2/174 33.7 0.01 coding (1188/1266 nt) rsmB1 ribosomal RNA small subunit methyltransferase B
?NC_014034 2508065 = 201 (0.890)coding (283/312 nt) RCAP_rcc02337 hypothetical protein
Rejected: Position hash score below cutoff.

CCTGCCGGGGTCCTGTCATCGGCTGTTTTGCCGGTCAGCCGTCCCGCCGCAACACGGCGATGAAGAAGCCGTCAAGCCCGCCGCGGTCCGGCCAGAAATCCGGGCGCAGGCGC....................................................................................................  >  NC_014034/311584‑311696
....................................................................................................CGGGCGCAGGCGCGGCCTTGAGCTGCGGGCGGTGGCCGCATGAAGCCCGCAGCGATCTTCCTTTATGAACTCTCGGGCAAGTCTGCCGAGCCCTTCGCGGCTGCGGGTTGGGA  >  NC_014034/2508065‑2508164
                                                                                                                                                                                                                     
                                               CGCAACACGGCGATGAAGAAGCCGTCAAGCCCGCCGCGGTCCGGCCAGAAATCCGGGCGCAGGCGCGGCCTTGAGCTGCGGGCGGTGGCCGCATGAAGCCC                                                                   >  2:315454/1‑101 (MQ=255)
                                                     ACGGCGATGAAGAAGCCGTCAAGCCCGCCGCGGTCCGGCCAGAAATCCGGGCGCAGGCGCGGCCTTGAGCTGCGGGCGGTGGCCGCATGAAGCCCGCAGCG                                                             <  1:315489/101‑1 (MQ=255)
                                                                                                                                                                                                                     
CCTGCCGGGGTCCTGTCATCGGCTGTTTTGCCGGTCAGCCGTCCCGCCGCAACACGGCGATGAAGAAGCCGTCAAGCCCGCCGCGGTCCGGCCAGAAATCCGGGCGCAGGCGC....................................................................................................  >  NC_014034/311584‑311696
....................................................................................................CGGGCGCAGGCGCGGCCTTGAGCTGCGGGCGGTGGCCGCATGAAGCCCGCAGCGATCTTCCTTTATGAACTCTCGGGCAAGTCTGCCGAGCCCTTCGCGGCTGCGGGTTGGGA  >  NC_014034/2508065‑2508164

Base quality scores:  ATCG  < 3 ≤  ATCG  < 24 ≤  ATCG  < 31 ≤  ATCG  < 35 ≤  ATCG  < 40 ≤  ATCG