New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 = 3184528240 (1.070)2 (0.010) 2/198 36.0 0.01 coding (922/1836 nt) ilvD dihydroxy‑acid dehydratase
?NC_014034 = 3185576 218 (0.960)coding (611/684 nt) exoD exopolysaccharide synthesis protein ExoD
Rejected: Position hash score below cutoff.

CATGGGCGGCTCGACCAACACGGTGCTGCACCTTCTGGCCATCGCCTATGAGGGCGGGGTGAATTTCACCATGGACGACATCGACCGGCTCAGCCGCAAGG....................................................................................................  >  NC_014034/3184428‑3184528
....................................................................................................GCGCTGGCGCTGGTGCATGGGGTGATCTGGGCGATGATCGCCGCCGCCGCGCATGTGCTGCACACCTGGTCCTGACCGCGCGACATGAAAAGGCCCCCGCC  <  NC_014034/3185576‑3185477
                                                                                                                                                                                                         
                                                         GGTGAATTTCACCATGGACGACATCGACCGGCTCAGCCGCAAGGCGCTGGCGCTGGTGCATGGGGTGATCTGGGCGATGATCGCCGCCGCCGCGCATGTGC                                             >  2:1993178/1‑101 (MQ=255)
                                                                          ACGACATCGACCGGCTCAGCCGCAAGGCGCTGGCGCTGGTGCATGGGGTGATCTGGGCGATGATCGCCGCCGCCGCGCATGTGCTGCACACCTGGTCCTGA                            <  1:1993307/101‑1 (MQ=255)
                                                                                                                                                                                                         
CATGGGCGGCTCGACCAACACGGTGCTGCACCTTCTGGCCATCGCCTATGAGGGCGGGGTGAATTTCACCATGGACGACATCGACCGGCTCAGCCGCAAGG....................................................................................................  >  NC_014034/3184428‑3184528
....................................................................................................GCGCTGGCGCTGGTGCATGGGGTGATCTGGGCGATGATCGCCGCCGCCGCGCATGTGCTGCACACCTGGTCCTGACCGCGCGACATGAAAAGGCCCCCGCC  <  NC_014034/3185576‑3185477

Base quality scores:  ATCG  < 3 ≤  ATCG  < 27 ≤  ATCG  < 31 ≤  ATCG  < 35 ≤  ATCG  < 41 ≤  ATCG