New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	= 31946	187 (0.900)	3 (0.010)	3/184	33.5	0.02	coding (2198/3501 nt)	RCAP_rcc00026	hypothetical protein
	?	NC_014034	= 1660616	190 (0.840)					coding (730/1539 nt)	nuoM	NADH‑quinone oxidoreductase subunit M
Rejected: Position hash score below cutoff.

CCAGATCGAAGGTCAGCGGCCCCTGCACCGATTGCGGCTCGATGAAACTGTTTGCCAGCGCGGTCTCGGCCCGGCCCGAAATCGCCAGATCGACGCTGGAGGCATCGG....................................................................................................  >  NC_014034/31839‑31946 ....................................................................................................GGCATCGGGCAACCAGGTGTGCACCGGCCACATCGGCATCTTCACCGCAAACGAGGCGAAGAAGGCCAGGAACAGCAGCGTCTGCACCCCGCCCGTCAGCGTCCACCA  <  NC_014034/1660616‑1660517                                                                                                                                                                                                                           AGGTCAGCGGCCCCTGCACCGATTGCGGCTCGATGAAACTGTTTGCCAGCGCGGTCTCGGCCCGGCCCGAAATCGCCAGATCGACGCTGGAGGCATCGGGg                                                                                                    >  1:2804453/1‑100 (MQ=255)                               ATTGCGGCTCGATGAAACTGTTTGCCAGCGCGGTCTCGGCCCGGCCCGAAATCGCCAGATCGACGCTGGAGGCATCGGGCAACCAGGTGTGCACCGGCCAC                                                                               >  1:3127050/1‑101 (MQ=255)                                    GGCTCGATGAAACTGTTTGCCAGCGCGGTCTCGGCCCGGCCCGAAATCGCCAGATCGACGCTGGAGGCATCGGGCAACCAGGTGTGCACCGGCCACATCGG                                                                          <  2:3126826/101‑1 (MQ=255)                                                                                                                                                                                                                  CCAGATCGAAGGTCAGCGGCCCCTGCACCGATTGCGGCTCGATGAAACTGTTTGCCAGCGCGGTCTCGGCCCGGCCCGAAATCGCCAGATCGACGCTGGAGGCATCGG....................................................................................................  >  NC_014034/31839‑31946 ....................................................................................................GGCATCGGGCAACCAGGTGTGCACCGGCCACATCGGCATCTTCACCGCAAACGAGGCGAAGAAGGCCAGGAACAGCAGCGTCTGCACCCCGCCCGTCAGCGTCCACCA  <  NC_014034/1660616‑1660517 Base quality scores:  ATCG  < 3 ≤  ATCG  < 23 ≤  ATCG  < 27 ≤  ATCG  < 33 ≤  ATCG  < 41 ≤  ATCG