New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	= 3217987	222 (1.090)	2 (0.010)	2/180	34.3	0.01	coding (75/594 nt)	dctR3	C4‑dicarboxylate transport transcriptional regulatory protein DctR
	?	NC_014034	= 3503981	217 (0.960)					coding (127/723 nt)	recO	DNA repair protein RecO
Rejected: Position hash score below cutoff.

GTCACCCTGCCCGTCCCGCAGGAGGGGGCCCCGGCATGAGTTTCACCGTTCATATCGTCGATGACGAGGAAAGCCTGCGCGACAGCCTGGGGTTTCTGTTCGCCTCGCGC....................................................................................................  >  NC_014034/3217878‑3217987 ....................................................................................................CGCCTCGCGCAAGATGGCGGCGGTGCTGATGCCCGGCTCGCATGTGGCTGTGGCCTGGCGGGCCCGGCTGGAAGATCAGCTGGGCAGCTTCACCGTCGAACCGCTGGCCT  <  NC_014034/3503981‑3503882                                                                                                                                                                                                                                                            TTTCACCGTTCATATCGTCGATGACGAGGAAAGCCTGCGCGACAGCCTGGGGTTTCTGTTCGCCTCGCGCAAGATGGCGGCGGTGCTGATGCCCGGCTCGC                                                                       >  1:2463976/1‑101 (MQ=255)                                                                      AAAGCCTGCGCGACAGCCTGGGGTTTCTGTTCGCCTCGCGCAAGATGGCGGCGGTGCTGATGCCCGGCTCGCATGTGGCTGTGGCCTGGCGGGCCCGGCTG                                          <  2:2463819/101‑1 (MQ=255)                                                                                                                                                                                                                    GTCACCCTGCCCGTCCCGCAGGAGGGGGCCCCGGCATGAGTTTCACCGTTCATATCGTCGATGACGAGGAAAGCCTGCGCGACAGCCTGGGGTTTCTGTTCGCCTCGCGC....................................................................................................  >  NC_014034/3217878‑3217987 ....................................................................................................CGCCTCGCGCAAGATGGCGGCGGTGCTGATGCCCGGCTCGCATGTGGCTGTGGCCTGGCGGGCCCGGCTGGAAGATCAGCTGGGCAGCTTCACCGTCGAACCGCTGGCCT  <  NC_014034/3503981‑3503882 Base quality scores:  ATCG  < 3 ≤  ATCG  < 24 ≤  ATCG  < 31 ≤  ATCG  < 34 ≤  ATCG  < 41 ≤  ATCG