New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 323822 =209 (1.020)2 (0.010) 2/182 34.5 0.01 coding (352/540 nt) nusG transcription antitermination protein NusG
?NC_014034 = 467196 216 (0.960)coding (362/783 nt) RCAP_rcc00437 alpha/beta fold family hydrolase
Rejected: Position hash score below cutoff.

GGCCCGCGGCGTCGTCCACTTCCTCGACCATGCCCGAGAAGCCCTCGAACGGGCCGTCGGTCACGGAAACATTCTCGCCGATCTCGAAGCGAATCAGGTTGCGCGGCGC....................................................................................................  <  NC_014034/323930‑323822
....................................................................................................GCGCGGCGCATGGCGGGCTGATCGCGGCGATGGAGGCGATGAAGCTCGAGGATCTGACGACGCGAAGCGAAGCCGACCGGCGGCTGGCGGAAACGGTGCAAGACCCGGG  <  NC_014034/467196‑467097
                                                                                                                                                                                                                 
                                                ACGGGCCGTCGGTCACGGAAACATTCTCGCCGATCTCGAAGCGAATCAGGTTGCGCGGCGCATGGCGGGCTGATCGCGGCGATGGAGGCGATGAAGCTCGA                                                              >  2:2963918/1‑101 (MQ=255)
                                                                            GCCGATCTCGAAGCGAATCAGGTTGCGCGGCGCATGGCGGGCTGATCGCGGCGATGGAGGCGATGAAGCTCGAGGATCTGACGACGCGAAGCGAAGCCGAC                                  <  1:2964139/101‑1 (MQ=255)
                                                                                                                                                                                                                 
GGCCCGCGGCGTCGTCCACTTCCTCGACCATGCCCGAGAAGCCCTCGAACGGGCCGTCGGTCACGGAAACATTCTCGCCGATCTCGAAGCGAATCAGGTTGCGCGGCGC....................................................................................................  <  NC_014034/323930‑323822
....................................................................................................GCGCGGCGCATGGCGGGCTGATCGCGGCGATGGAGGCGATGAAGCTCGAGGATCTGACGACGCGAAGCGAAGCCGACCGGCGGCTGGCGGAAACGGTGCAAGACCCGGG  <  NC_014034/467196‑467097

Base quality scores:  ATCG  < 3 ≤  ATCG  < 24 ≤  ATCG  < 29 ≤  ATCG  < 34 ≤  ATCG  < 40 ≤  ATCG