New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	= 3249445	222 (1.120)	2 (0.010)	2/176	33.9	0.01	coding (1348/1944 nt)	RCAP_rcc03056	hypothetical protein
	?	NC_014034	= 3450236	172 (0.760)					coding (271/1746 nt)	cydD	cysteine ABC transporter ATP‑binding protein/permease CydD
Rejected: Position hash score below cutoff.

ACCGGGCCCTCGGGGATCATGTCGACCCTCGGGGTCGACAGCCTCGGCAGCTTCGGCCCCTCTGCCACGACGGCAAGCGGGATCTACTATTACGACGCCACGCGCAGCAGCA...................................................................................................  >  NC_014034/3249334‑3249445 ....................................................................................................CGCGCAGCAGCATCACGAAGACGAAGCCCAGCGCCGCCTGCGGCACGCTCAGGCTGGCGGGCGGGGCGACAAGCCCGCCCAAGGCCAGCGCGACCAGCGCCGCCTGCGCCG  <  NC_014034/3450236‑3450138                                                                                                                                                                                                                                                            AGCCTCGGCAGCTTCGGCCCCTCTGCCACGACGGCAAGCGGGATCTACTATTACGACGCCACGCGCAGCAGCATCACGAAGACGAAGCCCAGCGCCGCCTG                                                                         >  2:1855789/1‑101 (MQ=255)                                                       GGCCCCTCTGCCACGACGGCAAGCGGGATCTACTATTACGACGCCACGCGCAGCAGCATCACGAAGACGAAGCCCAGCGCCGCCTGCGGCACGCTCAGGCT                                                          <  1:1855913/101‑1 (MQ=255)                                                                                                                                                                                                                     ACCGGGCCCTCGGGGATCATGTCGACCCTCGGGGTCGACAGCCTCGGCAGCTTCGGCCCCTCTGCCACGACGGCAAGCGGGATCTACTATTACGACGCCACGCGCAGCAGCA...................................................................................................  >  NC_014034/3249334‑3249445 ....................................................................................................CGCGCAGCAGCATCACGAAGACGAAGCCCAGCGCCGCCTGCGGCACGCTCAGGCTGGCGGGCGGGGCGACAAGCCCGCCCAAGGCCAGCGCGACCAGCGCCGCCTGCGCCG  <  NC_014034/3450236‑3450138 Base quality scores:  ATCG  < 3 ≤  ATCG  < 18 ≤  ATCG  < 24 ≤  ATCG  < 30 ≤  ATCG  < 38 ≤  ATCG