New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 3290273 =219 (1.080)2 (0.010) 2/180 34.3 0.01 coding (267/1407 nt) thrC threonine synthase
?NC_014034 = 3418615 232 (1.030)coding (937/1038 nt) ruvB holliday junction DNA helicase RuvB
Rejected: Position hash score below cutoff.

GGTGGCCTATCGCGTCATGGCGCCTTTCGTCGGCGACACCTTCACCGAGGCAGAGCTGAAAGGCGCCATCGCCAAGGCCTATGCGGGCTTCGGCCATGTCGCCCGCGCG....................................................................................................  <  NC_014034/3290381‑3290273
...................................................................................................CGCCCGCGCGGGGTGCGCTGAATGAGACCCTGCTGTAAAAGGTAAGGCTCGATCACCTCTTCCAGCGCATCGCGGCTTTCCGACAGCGCGGCGGACAGCGTCTCCACCCC  <  NC_014034/3418615‑3418516
                                                                                                                                                                                                                 
                                     atCTTCACCGAGGCAGAGCTGAAAGGCGCCATCGCCAAGGCCTATGCGGGCTTCGGCCATGTCGCCCGCGCGGGGTGCGCTGAATGAGACCCTGCTGTAAA                                                                         <  1:4179578/99‑1 (MQ=255)
                                         TCACCGAGGCAGAGCTGAAAGGCGCCATCGCCAAGGCCTATGCGGGCTTCGGCCATGTCGCCCGCGCGGGGTGCGCTGAATGAGACCCTGCTGTAAAAGat                                                                     >  2:4179317/1‑99 (MQ=255)
                                                                                                                                                                                                                 
GGTGGCCTATCGCGTCATGGCGCCTTTCGTCGGCGACACCTTCACCGAGGCAGAGCTGAAAGGCGCCATCGCCAAGGCCTATGCGGGCTTCGGCCATGTCGCCCGCGCG....................................................................................................  <  NC_014034/3290381‑3290273
...................................................................................................CGCCCGCGCGGGGTGCGCTGAATGAGACCCTGCTGTAAAAGGTAAGGCTCGATCACCTCTTCCAGCGCATCGCGGCTTTCCGACAGCGCGGCGGACAGCGTCTCCACCCC  <  NC_014034/3418615‑3418516

Base quality scores:  ATCG  < 3 ≤  ATCG  < 23 ≤  ATCG  < 29 ≤  ATCG  < 32 ≤  ATCG  < 39 ≤  ATCG