New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 = 3309877184 (0.870)2 (0.010) 2/188 35.1 0.01 coding (280/1614 nt) RCAP_rcc03113 hypothetical protein
?NC_014034 = 3309901 193 (0.850)coding (256/1614 nt) RCAP_rcc03113 hypothetical protein
Rejected: Position hash score below cutoff.

CCGGCGCGGCTTCTGCCGTCTCCTCGGGGGAGGTCAGCGCCGCCTCTGCGACCTCGGCCGCGCTTTCGATGGCCGCTTCGATTTCGCTCTCCAGCTCCGCCCCGAA....................................................................................................  >  NC_014034/3309772‑3309877
....................................................................................................CCCGAAATCGAAACCGCGTTCGGGCCCGCGTTCGGGGCGGAGCTGGAGAGCGAAATCGAAGCGGCCATCGAAAGCGCGGCCGAGGTCGCAGAGGCGGCGCTGACCT  <  NC_014034/3309901‑3309802
                                                                                                                                                                                                              
                                                                               GATTTCGCTCTCCAGCTCCGCCCCGAAATCGAAACCGCGTTCGGGCCCGCGTTCGGGGCGGAGCTGGAGAGCGAAATCGAAGCGGCCATCGAAAGCGCGGC                            <  1:116083/101‑1 (MQ=255)
                                                                               GATTTCGCTCTCCAGCTCCGCCCCGAAATCGAAACCGCGTTCGGGCCCGCGTTCGGGGCGGAGCTGGAGAGCGAAATCGAAGCGGCCATCGAAAGCGCGGC                            >  2:116062/1‑101 (MQ=255)
                                                                                                                                                                                                              
CCGGCGCGGCTTCTGCCGTCTCCTCGGGGGAGGTCAGCGCCGCCTCTGCGACCTCGGCCGCGCTTTCGATGGCCGCTTCGATTTCGCTCTCCAGCTCCGCCCCGAA....................................................................................................  >  NC_014034/3309772‑3309877
....................................................................................................CCCGAAATCGAAACCGCGTTCGGGCCCGCGTTCGGGGCGGAGCTGGAGAGCGAAATCGAAGCGGCCATCGAAAGCGCGGCCGAGGTCGCAGAGGCGGCGCTGACCT  <  NC_014034/3309901‑3309802

Base quality scores:  ATCG  < 3 ≤  ATCG  < 20 ≤  ATCG  < 26 ≤  ATCG  < 32 ≤  ATCG  < 41 ≤  ATCG