New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 331380 =217 (1.030)2 (0.010) 2/186 34.9 0.01 coding (526/4239 nt) rpoC DNA‑directed RNA polymerase beta' subunit
?NC_014034 = 3409249 186 (0.820)coding (244/627 nt) RCAP_rcc03207 hypothetical protein
Rejected: Position hash score below cutoff.

TCCTTCAGCTCTTCGCGCAGCTGTTCCGCGGTCGCCTCAAGGTCGATCGCCGAGAGCATCTCGCGGATCGCTTCCGCCCCGATATTCGCGGTGAAGGCGTCGGCGCC...................................................................................................  <  NC_014034/331486‑331380
....................................................................................................CGGCGCCCTGTCGCAGGCGGAAATCGACGCGAGCCCGGTGGCCGATCTGCTGTCCTCGCAGTTCGGGTCGATCGACACCGACAGCGACGGGCTTTTGACCGAGGCC  <  NC_014034/3409249‑3409151
                                                                                                                                                                                                              
                                                        tATCTCGCGGATCGCTTCCGCCCCGATATTCGCGGTGAAGGCGTCGGCGCCCTGTCGCAGGCGGAAATCGACGCGAGCCCGGTGGCCGATCTGCTGTCCTC                                                   <  1:2703788/100‑1 (MQ=255)
                                                         ATCTCGCGGATCGCTTCCGCCCCGATATTCGCGGTGAAGGCGTCGGCGCCCTGTCGCAGGCGGAAATCGACGCGAGCCCGGTGGCCGATCTGCTGTCCTCa                                                  >  2:2703598/1‑100 (MQ=255)
                                                                                                                                                                                                              
TCCTTCAGCTCTTCGCGCAGCTGTTCCGCGGTCGCCTCAAGGTCGATCGCCGAGAGCATCTCGCGGATCGCTTCCGCCCCGATATTCGCGGTGAAGGCGTCGGCGCC...................................................................................................  <  NC_014034/331486‑331380
....................................................................................................CGGCGCCCTGTCGCAGGCGGAAATCGACGCGAGCCCGGTGGCCGATCTGCTGTCCTCGCAGTTCGGGTCGATCGACACCGACAGCGACGGGCTTTTGACCGAGGCC  <  NC_014034/3409249‑3409151

Base quality scores:  ATCG  < 3 ≤  ATCG  < 27 ≤  ATCG  < 33 ≤  ATCG  < 35 ≤  ATCG  < 41 ≤  ATCG