New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 3336887 =220 (1.120)2 (0.010) 2/174 33.7 0.01 coding (378/1893 nt) fadD long‑chain‑fatty‑acid‑‑CoA ligase
?NC_014034 = 3733040 91 (0.400)coding (2156/2811 nt) RCAP_rcc03528 hypothetical protein
Rejected: Position hash score below cutoff.

GATCGTCTTGACATTCGGCGCGTGCTTGACCGCCTCGGCCGCCTTTTGCGCGATGTCGGATTTCGGGAAGCTTTTCAGCGTCACCAGCACCTTGGCTTTGGTCTCGCGCAGG..................................................................................................  <  NC_014034/3336998‑3336887
...................................................................................................GGTCTCGCGCAGGCGCGCTTCGCGCGGCGGCGGGGCCTCGACCGGGCCGGGGGCCGGTTGCGGGGCCACCGGCGCTGCGGCGGTCACGAGCGGCGCCGCGGGGGCGGGCTT  <  NC_014034/3733040‑3732943
                                                                                                                                                                                                                  
                                                                         TTCAGCGTCACCAGCACCTTGGCTTTGGTCTCGCGCAGGCGCGCTTCGCGCGGCGGCGGGGCCTCGACCGGGCCGGGGGCCGGTTGCGGGGCCACCGGCGC                                      >  2:1543956/1‑101 (MQ=255)
                                                                          TCAGCGTCACCAGCCCCTTGGCTTTGGTCTCGCGCAGGCGCGCTTCGCGCGGCGGCGGGGCCTCGACCGGGCCGGGGGCCGGTTGCGGGGCCACCGGCGCT                                     <  1:1544061/101‑1 (MQ=255)
                                                                                                                                                                                                                  
GATCGTCTTGACATTCGGCGCGTGCTTGACCGCCTCGGCCGCCTTTTGCGCGATGTCGGATTTCGGGAAGCTTTTCAGCGTCACCAGCACCTTGGCTTTGGTCTCGCGCAGG..................................................................................................  <  NC_014034/3336998‑3336887
...................................................................................................GGTCTCGCGCAGGCGCGCTTCGCGCGGCGGCGGGGCCTCGACCGGGCCGGGGGCCGGTTGCGGGGCCACCGGCGCTGCGGCGGTCACGAGCGGCGCCGCGGGGGCGGGCTT  <  NC_014034/3733040‑3732943

Base quality scores:  ATCG  < 3 ≤  ATCG  < 20 ≤  ATCG  < 27 ≤  ATCG  < 31 ≤  ATCG  < 41 ≤  ATCG