New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	3363179 =	194 (0.940)	2 (0.010)	2/182	34.5	0.01	intergenic (+188/‑47)	citE2/accA	citrate lyase subunit beta/acetyl‑CoA carboxylase carboxyl transferase subunit alpha
	?	NC_014034	3422456 =	207 (0.920)					coding (707/768 nt)	truA	tRNA pseudouridine synthase A
Rejected: Position hash score below cutoff.

AGTTCCTCGGCCTTGCCCTCGATCTCGGCGAGCGGCTTTTCGAACTCGAGATAGGTCGTCATCGAAGCCTCCGTAACGCAGTCGTGGCCTATATGACCGCGCGGGCCGG....................................................................................................  <  NC_014034/3363287‑3363179 ....................................................................................................GCGGGCCGGTCTGTCCGCCGCAGGGGCTTTACCTGTGCGGCGTCGGATACCCCGAGGATCCGTTCGCCTGAATCATTCGGCGGGCAGGTCCGCCGCCTGCTCGGTGCGT  >  NC_014034/3422456‑3422555                                                                                                                                                                                                                                                                   gatctGGTCGTCATCGAAGCCTCCGTAACGCAGTCGTGGCCTATATGACCGCGCGGGCCGGTCTGTCCGCCGCAGGGGCTTTACCTGTGCGGCGTCGGATA                                                              <  2:1247646/96‑1 (MQ=255)                                                      GGTCGTCATCGAAGCCTCCGTAACGCAGTCGTGGCCTATATGACCGCGCGGGCCGGTCTGTCCGCCGCAGGGGCTTTACCTGTGCGGCGTCGGATAagatc                                                         >  1:1247739/1‑96 (MQ=255)                                                                                                                                                                                                                   AGTTCCTCGGCCTTGCCCTCGATCTCGGCGAGCGGCTTTTCGAACTCGAGATAGGTCGTCATCGAAGCCTCCGTAACGCAGTCGTGGCCTATATGACCGCGCGGGCCGG....................................................................................................  <  NC_014034/3363287‑3363179 ....................................................................................................GCGGGCCGGTCTGTCCGCCGCAGGGGCTTTACCTGTGCGGCGTCGGATACCCCGAGGATCCGTTCGCCTGAATCATTCGGCGGGCAGGTCCGCCGCCTGCTCGGTGCGT  >  NC_014034/3422456‑3422555 Base quality scores:  ATCG  < 3 ≤  ATCG  < 20 ≤  ATCG  < 26 ≤  ATCG  < 32 ≤  ATCG  < 40 ≤  ATCG