New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 3376083 =233 (1.060)2 (0.010) 2/194 35.6 0.01 coding (416/843 nt) RCAP_rcc03177 EAL domain‑containing protein
?NC_014034 3551202 = 245 (1.080)coding (634/1575 nt) cobQ3 cobyric acid synthase CobQ
Rejected: Position hash score below cutoff.

TTCGTCTGCATGTCCTGCATGAAGACCGACACCAGTTCCGGCATCATCATCGCCGAGGATTCGGTGATTTCCAGAATCAGCCTTTCGCCGATGCGGTCATCCA....................................................................................................  <  NC_014034/3376185‑3376083
....................................................................................................CCAGCGCCCCGCCGCGGTCGTTGTCGGTCAGCAGAACCACCGGCAGATCGGCCTCTTCGGCCAGACGCATGTTGGTGATGTCGCAATGCTTGATCCAGGTCTC  >  NC_014034/3551202‑3551301
                                                                                                                                                                                                           
                                          ATCATCATCGCCGAGGATTCGGTGATTTCCAGAATCAGCCTTTCGCCGATGCGGTCATCCAGCGCCCCGCCGCGGTCGTTGTCGGTCAGCAGAACCACCGG                                                              >  1:3251365/1‑101 (MQ=255)
                                                   GCCGAGGATTCGGTGATTTCCAGAATCAGCCTTTCGCCGATGCGGTCATCCAGCGCCCCGCCGCGGTCGTTGTCGGTCAGCAGAACCACCGGCAGATCGGC                                                     <  2:3251133/101‑1 (MQ=255)
                                                                                                                                                                                                           
TTCGTCTGCATGTCCTGCATGAAGACCGACACCAGTTCCGGCATCATCATCGCCGAGGATTCGGTGATTTCCAGAATCAGCCTTTCGCCGATGCGGTCATCCA....................................................................................................  <  NC_014034/3376185‑3376083
....................................................................................................CCAGCGCCCCGCCGCGGTCGTTGTCGGTCAGCAGAACCACCGGCAGATCGGCCTCTTCGGCCAGACGCATGTTGGTGATGTCGCAATGCTTGATCCAGGTCTC  >  NC_014034/3551202‑3551301

Base quality scores:  ATCG  < 3 ≤  ATCG  < 33 ≤  ATCG  < 34 ≤  ATCG  < 35 ≤  ATCG  < 41 ≤  ATCG