New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 3681632 =249 (1.140)2 (0.010) 2/194 35.6 0.01 coding (78/447 nt) RCAP_rcc03471 NUDIX superfamily hydrolase
?NC_014034 3682529 = 226 (1.000)coding (152/975 nt) thrB homoserine kinase
Rejected: Position hash score below cutoff.

CGACAGCCCCTGGGGAGAGATCGGATGATCGGCCTGCCCCCGTTTCTGCGCAATCTGCTGGGCCACCGCCCCGAGGCGCTGCAGGTGGCGGCGATCTGTCGG....................................................................................................  <  NC_014034/3681733‑3681632
...................................................................................................CGGTGCAGCCGCAGCGCGGCCTTGGTGCCGCTGGGCAGGATCGTGCCGAAGACGATGTTTTCCGACCGCCAGATCAGCTGCAAGGGCGCACCCATGCACAGCC  >  NC_014034/3682529‑3682628
                                                                                                                                                                                                          
                                                                           tCGCTGCAGGTGGCGGCGATCTGTCGGTGCAGCCGCAGCGCGGCCTTGGTGCCGCTGGGCAGGATCGTGCCGAAGACGATGTTTTCCGACCGCCAAATCAG                            <  1:130145/100‑1 (MQ=255)
                                                                            CGCTGCAGGTGGCGGCGATCTGTCGGTGCAGCCGCAGCGCGGCCTTGGTGCCGCTGGGCAGGATCGTGCCGAAGACGATGTTTTCCGACCGCCAAATCAGa                           >  2:130124/1‑100 (MQ=255)
                                                                                                                                                                                                          
CGACAGCCCCTGGGGAGAGATCGGATGATCGGCCTGCCCCCGTTTCTGCGCAATCTGCTGGGCCACCGCCCCGAGGCGCTGCAGGTGGCGGCGATCTGTCGG....................................................................................................  <  NC_014034/3681733‑3681632
...................................................................................................CGGTGCAGCCGCAGCGCGGCCTTGGTGCCGCTGGGCAGGATCGTGCCGAAGACGATGTTTTCCGACCGCCAGATCAGCTGCAAGGGCGCACCCATGCACAGCC  >  NC_014034/3682529‑3682628

Base quality scores:  ATCG  < 3 ≤  ATCG  < 29 ≤  ATCG  < 33 ≤  ATCG  < 35 ≤  ATCG  < 41 ≤  ATCG