New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	= 3722808	253 (1.180)	2 (0.010)	2/190	35.3	0.01	coding (706/786 nt)	flgG	flagellar basal‑body rod protein FlgG
	?	NC_014034	= 3722829	248 (1.100)					coding (685/786 nt)	flgG	flagellar basal‑body rod protein FlgG
Rejected: Position hash score below cutoff.

CAAGGGCAAGGGTCAGACGGATCATCAGCGCACCTGTGTCGTCGCTTGCAGCATCTCGTCGGCGGCGGTGATCACCTTGGCGTTCATCTCGTAGCCGCGCTGCGC....................................................................................................  >  NC_014034/3722704‑3722808 ....................................................................................................TGCGCGAGATCACCGAGCTGATCAAGGCGCAGCGCGGCTACGAGATGAACGCCAAGGTGATCACCGCCGCCGACGAGATGCTGCAAGCGACGACACAGGTGCGCT  <  NC_014034/3722829‑3722730                                                                                                                                                                                                                                                                                      TCACCTTGGCGTTCATCTCGTAGCCGCGCTGCGCGAGATCACCGAGCTGATCAAGGCGCAGCGCGGCTACGAGATGAACGCCAAGGTGCTGACCGCCGCCG                                   >  2:1959269/1‑101 (MQ=255)                                                                          ACCTTGGCGTTCATCTCGTAGCCGCGCTGCGCGAGATCACCGAGCTGATCAAGGCGCAGCGCGGCTACGAGATGAACGCCAAGGTGATCACCGCCGCCGAC                                 <  1:1959398/101‑1 (MQ=255)                                                                                                                                                                                                               CAAGGGCAAGGGTCAGACGGATCATCAGCGCACCTGTGTCGTCGCTTGCAGCATCTCGTCGGCGGCGGTGATCACCTTGGCGTTCATCTCGTAGCCGCGCTGCGC....................................................................................................  >  NC_014034/3722704‑3722808 ....................................................................................................TGCGCGAGATCACCGAGCTGATCAAGGCGCAGCGCGGCTACGAGATGAACGCCAAGGTGATCACCGCCGCCGACGAGATGCTGCAAGCGACGACACAGGTGCGCT  <  NC_014034/3722829‑3722730 Base quality scores:  ATCG  < 3 ≤  ATCG  < 6 ≤  ATCG  < 17 ≤  ATCG  < 24 ≤  ATCG  < 35 ≤  ATCG