New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 372855 =208 (0.990)2 (0.010) 2/186 34.9 0.01 coding (816/1848 nt) oxaA inner membrane protein OxaA
?NC_014034 883322 = 208 (0.920)coding (1037/1938 nt) mrdA peptidoglycan glycosyltransferase
Rejected: Position hash score below cutoff.

TACAAGAAGATCACCGATCTTGACGCGCTCGAGGGCGAGGGTCAGGCCGATGTGCGCAGCGCCGATACCGGCGGCTGGGCCGGGTTCACCGACAAATACTGGATGACC....................................................................................................  <  NC_014034/372962‑372855
.....................................................................................................GATGACCCCGGCTTCGAGCGCGGCAAGCAGCGTCACCAGCTTGAAGGTCGAGCCGGGCGGATAGACGCCCTGCACCGTCTTGTCGGCCAGCGGCCGGTGGTCGTTTT  >  NC_014034/883322‑883421
                                                                                                                                                                                                                
                                    GAGGGTCAGGCCGATGTGCGCAGCGCCGATACCGGCGGCTGGGCCGGGTTCACCGACAAATACTGGATGACCCCGGCTTCGAGCGCGGCAAGCAGCGTCAC                                                                         >  1:1757921/1‑101 (MQ=255)
                                                            GCCGATCCCGGCGGCTGGGCCGGGTTCACCGACAAATACTGGATGACCCCGGCTTCGAGCGCGGCAAGCAGCGTCACCAGCTTGAAGGTCGAGCCGGGCGG                                                 <  2:1757802/101‑1 (MQ=255)
                                                                                                                                                                                                                
TACAAGAAGATCACCGATCTTGACGCGCTCGAGGGCGAGGGTCAGGCCGATGTGCGCAGCGCCGATACCGGCGGCTGGGCCGGGTTCACCGACAAATACTGGATGACC....................................................................................................  <  NC_014034/372962‑372855
.....................................................................................................GATGACCCCGGCTTCGAGCGCGGCAAGCAGCGTCACCAGCTTGAAGGTCGAGCCGGGCGGATAGACGCCCTGCACCGTCTTGTCGGCCAGCGGCCGGTGGTCGTTTT  >  NC_014034/883322‑883421

Base quality scores:  ATCG  < 3 ≤  ATCG  < 11 ≤  ATCG  < 18 ≤  ATCG  < 27 ≤  ATCG  < 38 ≤  ATCG